Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ABCA1O95477 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ABCA1O95477 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.24□□□□□ -0.29
ABCA1O95477 AC005229.1-201ENST00000392885 409 ntBASIC13.24□□□□□ -0.29
ABCA1O95477 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.24□□□□□ -0.29
ABCA1O95477 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ABCA1O95477 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.24□□□□□ -0.29
ABCA1O95477 PTP4A1P2-201ENST00000546033 454 ntBASIC13.24□□□□□ -0.29
ABCA1O95477 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.24□□□□□ -0.29
ABCA1O95477 LINC01115-203ENST00000606068 577 ntBASIC13.24□□□□□ -0.29
ABCA1O95477 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.24□□□□□ -0.29
ABCA1O95477 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.24□□□□□ -0.29
ABCA1O95477 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.24□□□□□ -0.29
ABCA1O95477 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ABCA1O95477 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.24□□□□□ -0.29
ABCA1O95477 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ABCA1O95477 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ABCA1O95477 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ABCA1O95477 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ABCA1O95477 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
ABCA1O95477 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.23□□□□□ -0.29
ABCA1O95477 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.23□□□□□ -0.29
ABCA1O95477 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.23□□□□□ -0.29
ABCA1O95477 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.23□□□□□ -0.29
ABCA1O95477 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.23□□□□□ -0.29
ABCA1O95477 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.23□□□□□ -0.29
ABCA1O95477 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.23□□□□□ -0.29
ABCA1O95477 BCRP2-202ENST00000447763 634 ntBASIC13.23□□□□□ -0.29
ABCA1O95477 BCRP6-201ENST00000510112 632 ntBASIC13.23□□□□□ -0.29
ABCA1O95477 BCRP7-201ENST00000511549 544 ntBASIC13.23□□□□□ -0.29
ABCA1O95477 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.23□□□□□ -0.29
ABCA1O95477 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.23□□□□□ -0.29
ABCA1O95477 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.23□□□□□ -0.29
ABCA1O95477 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.23□□□□□ -0.29
ABCA1O95477 RN7SL219P-201ENST00000582872 296 ntBASIC13.23□□□□□ -0.29
ABCA1O95477 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ABCA1O95477 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.23□□□□□ -0.29
ABCA1O95477 AL365330.1-201ENST00000607459 531 ntBASIC13.23□□□□□ -0.29
ABCA1O95477 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.23□□□□□ -0.29
ABCA1O95477 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.23□□□□□ -0.29
ABCA1O95477 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ABCA1O95477 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ABCA1O95477 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ABCA1O95477 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ABCA1O95477 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ABCA1O95477 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
ABCA1O95477 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.23□□□□□ -0.29
ABCA1O95477 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ABCA1O95477 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ABCA1O95477 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.23□□□□□ -0.29
ABCA1O95477 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ABCA1O95477 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.23□□□□□ -0.29
ABCA1O95477 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ABCA1O95477 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
ABCA1O95477 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ABCA1O95477 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ABCA1O95477 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ABCA1O95477 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ABCA1O95477 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.23□□□□□ -0.29
ABCA1O95477 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ABCA1O95477 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
ABCA1O95477 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ABCA1O95477 HIST3H2BA-201ENST00000436555 524 ntBASIC13.23□□□□□ -0.29
ABCA1O95477 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.23□□□□□ -0.29
ABCA1O95477 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ABCA1O95477 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.23□□□□□ -0.29
ABCA1O95477 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.23□□□□□ -0.29
ABCA1O95477 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.23□□□□□ -0.29
ABCA1O95477 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.23□□□□□ -0.29
ABCA1O95477 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ABCA1O95477 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ABCA1O95477 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.23□□□□□ -0.29
ABCA1O95477 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.23□□□□□ -0.29
ABCA1O95477 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
ABCA1O95477 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
ABCA1O95477 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
ABCA1O95477 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.22□□□□□ -0.29
ABCA1O95477 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ABCA1O95477 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.22□□□□□ -0.29
ABCA1O95477 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
ABCA1O95477 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ABCA1O95477 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms