Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KDM4BO94953 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KDM4BO94953 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.92□□□□□ -0.18
KDM4BO94953 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
KDM4BO94953 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
KDM4BO94953 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
KDM4BO94953 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.91□□□□□ -0.18
KDM4BO94953 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.91□□□□□ -0.18
KDM4BO94953 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.91□□□□□ -0.18
KDM4BO94953 AC005089.1-201ENST00000619486 2241 ntBASIC13.91□□□□□ -0.18
KDM4BO94953 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.91□□□□□ -0.18
KDM4BO94953 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.91□□□□□ -0.18
KDM4BO94953 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.91□□□□□ -0.18
KDM4BO94953 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 HAUS4P1-201ENST00000406739 1145 ntBASIC13.91□□□□□ -0.18
KDM4BO94953 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.91□□□□□ -0.18
KDM4BO94953 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.91□□□□□ -0.18
KDM4BO94953 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
KDM4BO94953 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.91□□□□□ -0.18
KDM4BO94953 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.91□□□□□ -0.18
KDM4BO94953 AC079776.4-201ENST00000511039 504 ntBASIC13.91□□□□□ -0.18
KDM4BO94953 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.91□□□□□ -0.18
KDM4BO94953 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
KDM4BO94953 AL009183.1-201ENST00000603760 355 ntBASIC13.91□□□□□ -0.18
KDM4BO94953 Z83851.2-201ENST00000609564 659 ntBASIC13.91□□□□□ -0.18
KDM4BO94953 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.91□□□□□ -0.18
KDM4BO94953 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
KDM4BO94953 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
KDM4BO94953 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
KDM4BO94953 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.91□□□□□ -0.18
KDM4BO94953 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
KDM4BO94953 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
KDM4BO94953 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
KDM4BO94953 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KDM4BO94953 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
KDM4BO94953 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.9□□□□□ -0.18
KDM4BO94953 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
KDM4BO94953 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
KDM4BO94953 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
KDM4BO94953 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
KDM4BO94953 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
KDM4BO94953 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.9□□□□□ -0.18
KDM4BO94953 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.9□□□□□ -0.18
KDM4BO94953 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
KDM4BO94953 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.9□□□□□ -0.18
KDM4BO94953 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.9□□□□□ -0.18
KDM4BO94953 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.9□□□□□ -0.18
KDM4BO94953 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
KDM4BO94953 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
KDM4BO94953 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.9□□□□□ -0.18
KDM4BO94953 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 AC023141.13-201ENST00000604991 943 ntBASIC13.9□□□□□ -0.18
KDM4BO94953 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.9□□□□□ -0.18
KDM4BO94953 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.9□□□□□ -0.18
KDM4BO94953 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.9□□□□□ -0.18
KDM4BO94953 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
KDM4BO94953 AC092127.1-201ENST00000567093 3455 ntBASIC13.9□□□□□ -0.18
KDM4BO94953 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.9□□□□□ -0.18
KDM4BO94953 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.9□□□□□ -0.18
KDM4BO94953 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
KDM4BO94953 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.9□□□□□ -0.18
KDM4BO94953 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KDM4BO94953 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms