Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.43■□□□□ 0.22
BEST1O76090 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.43■□□□□ 0.22
BEST1O76090 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BEST1O76090 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.43■□□□□ 0.22
BEST1O76090 AC084364.1-201ENST00000551967 1556 ntBASIC16.43■□□□□ 0.22
BEST1O76090 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.42■□□□□ 0.22
BEST1O76090 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 INTS4P2-202ENST00000614726 2019 ntBASIC16.42■□□□□ 0.22
BEST1O76090 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.42■□□□□ 0.22
BEST1O76090 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.42■□□□□ 0.22
BEST1O76090 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.42■□□□□ 0.22
BEST1O76090 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.42■□□□□ 0.22
BEST1O76090 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.42■□□□□ 0.22
BEST1O76090 AC124283.3-201ENST00000570869 594 ntBASIC16.42■□□□□ 0.22
BEST1O76090 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.42■□□□□ 0.22
BEST1O76090 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.42■□□□□ 0.22
BEST1O76090 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
BEST1O76090 AL033527.5-201ENST00000641382 801 ntBASIC16.42■□□□□ 0.22
BEST1O76090 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.42■□□□□ 0.22
BEST1O76090 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
BEST1O76090 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
BEST1O76090 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BEST1O76090 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.42■□□□□ 0.22
BEST1O76090 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST1O76090 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BEST1O76090 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST1O76090 AC136621.1-201ENST00000624017 2304 ntBASIC16.41■□□□□ 0.22
BEST1O76090 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST1O76090 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
BEST1O76090 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST1O76090 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST1O76090 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST1O76090 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
BEST1O76090 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST1O76090 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
BEST1O76090 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST1O76090 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.41■□□□□ 0.22
BEST1O76090 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST1O76090 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST1O76090 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
BEST1O76090 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.41■□□□□ 0.22
BEST1O76090 AC134915.1-201ENST00000426461 574 ntBASIC16.41■□□□□ 0.22
BEST1O76090 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BEST1O76090 GAPDHP40-201ENST00000505218 1006 ntBASIC16.41■□□□□ 0.22
BEST1O76090 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
BEST1O76090 CR383656.12-201ENST00000549567 513 ntBASIC16.41■□□□□ 0.22
BEST1O76090 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.41■□□□□ 0.22
BEST1O76090 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.41■□□□□ 0.22
BEST1O76090 AC025181.2-201ENST00000606994 802 ntBASIC16.41■□□□□ 0.22
BEST1O76090 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
BEST1O76090 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.41■□□□□ 0.22
BEST1O76090 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST1O76090 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.41■□□□□ 0.22
BEST1O76090 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.41■□□□□ 0.22
BEST1O76090 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST1O76090 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BEST1O76090 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.41■□□□□ 0.22
BEST1O76090 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.41■□□□□ 0.22
BEST1O76090 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
BEST1O76090 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST1O76090 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST1O76090 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST1O76090 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST1O76090 AC020658.6-201ENST00000623564 1870 ntBASIC16.4■□□□□ 0.22
BEST1O76090 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST1O76090 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
BEST1O76090 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.4■□□□□ 0.22
BEST1O76090 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.4■□□□□ 0.22
BEST1O76090 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST1O76090 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BEST1O76090 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.4■□□□□ 0.22
BEST1O76090 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.4■□□□□ 0.22
BEST1O76090 AC026410.3-201ENST00000514280 936 ntBASIC16.4■□□□□ 0.22
BEST1O76090 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
BEST1O76090 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.4■□□□□ 0.22
BEST1O76090 AC133539.2-201ENST00000604757 467 ntBASIC16.4■□□□□ 0.22
BEST1O76090 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.4■□□□□ 0.22
BEST1O76090 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.4■□□□□ 0.22
BEST1O76090 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.4■□□□□ 0.22
BEST1O76090 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms