Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 AC023024.2-201ENST00000623561 1993 ntBASIC13.32□□□□□ -0.28
PDCD6O75340 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PDCD6O75340 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 CICP24-201ENST00000605464 2705 ntBASIC13.32□□□□□ -0.28
PDCD6O75340 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
PDCD6O75340 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PDCD6O75340 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.31□□□□□ -0.28
PDCD6O75340 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.31□□□□□ -0.28
PDCD6O75340 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.31□□□□□ -0.28
PDCD6O75340 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.31□□□□□ -0.28
PDCD6O75340 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PDCD6O75340 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.31□□□□□ -0.28
PDCD6O75340 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PDCD6O75340 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PDCD6O75340 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.31□□□□□ -0.28
PDCD6O75340 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.31□□□□□ -0.28
PDCD6O75340 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PDCD6O75340 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.31□□□□□ -0.28
PDCD6O75340 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PDCD6O75340 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
PDCD6O75340 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PDCD6O75340 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.31□□□□□ -0.28
PDCD6O75340 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PDCD6O75340 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.31□□□□□ -0.28
PDCD6O75340 AC023274.1-201ENST00000418278 595 ntBASIC13.31□□□□□ -0.28
PDCD6O75340 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.31□□□□□ -0.28
PDCD6O75340 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.31□□□□□ -0.28
PDCD6O75340 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.31□□□□□ -0.28
PDCD6O75340 ACTG1P14-201ENST00000446382 1122 ntBASIC13.31□□□□□ -0.28
PDCD6O75340 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PDCD6O75340 TIMM8BP1-201ENST00000452384 211 ntBASIC13.31□□□□□ -0.28
PDCD6O75340 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.31□□□□□ -0.28
PDCD6O75340 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.31□□□□□ -0.28
PDCD6O75340 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.31□□□□□ -0.28
PDCD6O75340 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.31□□□□□ -0.28
PDCD6O75340 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.31□□□□□ -0.28
PDCD6O75340 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.31□□□□□ -0.28
PDCD6O75340 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.31□□□□□ -0.28
PDCD6O75340 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PDCD6O75340 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
PDCD6O75340 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PDCD6O75340 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PDCD6O75340 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.3□□□□□ -0.28
PDCD6O75340 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PDCD6O75340 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PDCD6O75340 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
PDCD6O75340 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PDCD6O75340 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.3□□□□□ -0.28
PDCD6O75340 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PDCD6O75340 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PDCD6O75340 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PDCD6O75340 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.3□□□□□ -0.28
PDCD6O75340 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.3□□□□□ -0.28
PDCD6O75340 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PDCD6O75340 UXT-AS1-201ENST00000590504 1525 ntBASIC13.3□□□□□ -0.28
PDCD6O75340 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
PDCD6O75340 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.3□□□□□ -0.28
PDCD6O75340 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.3□□□□□ -0.28
PDCD6O75340 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PDCD6O75340 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
PDCD6O75340 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PDCD6O75340 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
PDCD6O75340 AP3S2-216ENST00000617003 1561 ntBASIC13.3□□□□□ -0.28
PDCD6O75340 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms