Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.18■□□□□ 0.02
CPNE3O75131 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.18■□□□□ 0.02
CPNE3O75131 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.18■□□□□ 0.02
CPNE3O75131 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.18■□□□□ 0.02
CPNE3O75131 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CPNE3O75131 AC104640.1-201ENST00000562617 2109 ntBASIC15.18■□□□□ 0.02
CPNE3O75131 AC092337.1-201ENST00000568699 1129 ntBASIC15.18■□□□□ 0.02
CPNE3O75131 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.18■□□□□ 0.02
CPNE3O75131 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 AC008494.3-201ENST00000606615 944 ntBASIC15.18■□□□□ 0.02
CPNE3O75131 AC099568.2-201ENST00000609194 695 ntBASIC15.18■□□□□ 0.02
CPNE3O75131 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CPNE3O75131 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.18■□□□□ 0.02
CPNE3O75131 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.18■□□□□ 0.02
CPNE3O75131 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.18■□□□□ 0.02
CPNE3O75131 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.18■□□□□ 0.02
CPNE3O75131 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CPNE3O75131 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CPNE3O75131 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 AL691432.1-201ENST00000596308 1422 ntBASIC15.17■□□□□ 0.02
CPNE3O75131 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.17■□□□□ 0.02
CPNE3O75131 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE3O75131 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.17■□□□□ 0.02
CPNE3O75131 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE3O75131 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CPNE3O75131 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CPNE3O75131 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.17■□□□□ 0.02
CPNE3O75131 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CPNE3O75131 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CPNE3O75131 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE3O75131 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CPNE3O75131 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 DGCR5-201ENST00000399539 862 ntBASIC15.17■□□□□ 0.02
CPNE3O75131 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
CPNE3O75131 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.17■□□□□ 0.02
CPNE3O75131 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.17■□□□□ 0.02
CPNE3O75131 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.17■□□□□ 0.02
CPNE3O75131 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.17■□□□□ 0.02
CPNE3O75131 HIST3H2BA-201ENST00000436555 524 ntBASIC15.17■□□□□ 0.02
CPNE3O75131 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE3O75131 AC011495.1-201ENST00000498085 584 ntBASIC15.17■□□□□ 0.02
CPNE3O75131 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE3O75131 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.17■□□□□ 0.02
CPNE3O75131 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE3O75131 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.17■□□□□ 0.02
CPNE3O75131 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.17■□□□□ 0.02
CPNE3O75131 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE3O75131 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE3O75131 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CPNE3O75131 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.17■□□□□ 0.02
CPNE3O75131 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE3O75131 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.17■□□□□ 0.02
CPNE3O75131 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.17■□□□□ 0.02
CPNE3O75131 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE3O75131 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.17■□□□□ 0.02
CPNE3O75131 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE3O75131 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CPNE3O75131 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE3O75131 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
CPNE3O75131 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms