Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.44■□□□□ 0.06
PEX1O43933 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PEX1O43933 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PEX1O43933 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PEX1O43933 C8orf49-201ENST00000525043 1968 ntBASIC15.44■□□□□ 0.06
PEX1O43933 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.44■□□□□ 0.06
PEX1O43933 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PEX1O43933 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PEX1O43933 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.43■□□□□ 0.06
PEX1O43933 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PEX1O43933 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PEX1O43933 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PEX1O43933 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PEX1O43933 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.43■□□□□ 0.06
PEX1O43933 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.43■□□□□ 0.06
PEX1O43933 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.43■□□□□ 0.06
PEX1O43933 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
PEX1O43933 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PEX1O43933 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.43■□□□□ 0.06
PEX1O43933 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.43■□□□□ 0.06
PEX1O43933 AC140658.5-201ENST00000438532 169 ntBASIC15.43■□□□□ 0.06
PEX1O43933 METTL21AP1-201ENST00000438852 635 ntBASIC15.43■□□□□ 0.06
PEX1O43933 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PEX1O43933 AP000344.2-201ENST00000512987 629 ntBASIC15.43■□□□□ 0.06
PEX1O43933 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.43■□□□□ 0.06
PEX1O43933 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.43■□□□□ 0.06
PEX1O43933 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PEX1O43933 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PEX1O43933 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.43■□□□□ 0.06
PEX1O43933 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.43■□□□□ 0.06
PEX1O43933 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PEX1O43933 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PEX1O43933 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PEX1O43933 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PEX1O43933 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PEX1O43933 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
PEX1O43933 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PEX1O43933 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PEX1O43933 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
PEX1O43933 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PEX1O43933 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PEX1O43933 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
PEX1O43933 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PEX1O43933 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.43■□□□□ 0.06
PEX1O43933 AC012569.1-201ENST00000591191 1524 ntBASIC15.43■□□□□ 0.06
PEX1O43933 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.43■□□□□ 0.06
PEX1O43933 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PEX1O43933 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PEX1O43933 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.43■□□□□ 0.06
PEX1O43933 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.42■□□□□ 0.06
PEX1O43933 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
PEX1O43933 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
PEX1O43933 AL353732.1-201ENST00000569618 1459 ntBASIC15.42■□□□□ 0.06
PEX1O43933 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.42■□□□□ 0.06
PEX1O43933 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.42■□□□□ 0.06
PEX1O43933 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.42■□□□□ 0.06
PEX1O43933 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.42■□□□□ 0.06
PEX1O43933 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.42■□□□□ 0.06
PEX1O43933 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 OR2I1P-210ENST00000642037 4691 ntBASIC15.42■□□□□ 0.06
PEX1O43933 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PEX1O43933 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.42■□□□□ 0.06
PEX1O43933 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PEX1O43933 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PEX1O43933 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.42■□□□□ 0.06
PEX1O43933 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PEX1O43933 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms