Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SLC28A2O43868 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC28A2O43868 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SLC28A2O43868 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
SLC28A2O43868 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SLC28A2O43868 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLC28A2O43868 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A2O43868 AP003680.1-201ENST00000598970 3660 ntBASIC15.23■□□□□ 0.03
SLC28A2O43868 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SLC28A2O43868 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC28A2O43868 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLC28A2O43868 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLC28A2O43868 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC28A2O43868 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC28A2O43868 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC28A2O43868 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SLC28A2O43868 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC28A2O43868 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLC28A2O43868 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC28A2O43868 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.23■□□□□ 0.03
SLC28A2O43868 AC109635.5-201ENST00000533593 962 ntBASIC15.23■□□□□ 0.03
SLC28A2O43868 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC28A2O43868 AC009407.1-201ENST00000568958 598 ntBASIC15.23■□□□□ 0.03
SLC28A2O43868 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.23■□□□□ 0.03
SLC28A2O43868 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
SLC28A2O43868 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC28A2O43868 AC007967.4-201ENST00000614700 386 ntBASIC15.23■□□□□ 0.03
SLC28A2O43868 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC28A2O43868 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SLC28A2O43868 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC28A2O43868 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC28A2O43868 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC28A2O43868 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC28A2O43868 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC28A2O43868 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC28A2O43868 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLC28A2O43868 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC28A2O43868 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SLC28A2O43868 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC28A2O43868 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC28A2O43868 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC28A2O43868 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC28A2O43868 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SLC28A2O43868 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC28A2O43868 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC28A2O43868 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC28A2O43868 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 AC135586.1-201ENST00000539323 574 ntBASIC15.22■□□□□ 0.03
SLC28A2O43868 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC28A2O43868 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC28A2O43868 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC28A2O43868 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC28A2O43868 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.22■□□□□ 0.03
SLC28A2O43868 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC28A2O43868 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC28A2O43868 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC28A2O43868 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
SLC28A2O43868 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC28A2O43868 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SLC28A2O43868 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC28A2O43868 AC007326.2-201ENST00000624224 7579 ntBASIC15.22■□□□□ 0.03
SLC28A2O43868 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SLC28A2O43868 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC28A2O43868 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC28A2O43868 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC28A2O43868 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC28A2O43868 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC28A2O43868 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC28A2O43868 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SLC28A2O43868 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC28A2O43868 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC28A2O43868 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC28A2O43868 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SLC28A2O43868 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SLC28A2O43868 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC28A2O43868 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC28A2O43868 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms