Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CHD1O14646 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD1O14646 AC006122.1-201ENST00000493323 440 ntBASIC24.58■■□□□ 1.53
CHD1O14646 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC24.58■■□□□ 1.53
CHD1O14646 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC24.58■■□□□ 1.53
CHD1O14646 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC24.58■■□□□ 1.53
CHD1O14646 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC24.58■■□□□ 1.53
CHD1O14646 AC139713.2-201ENST00000641328 2723 ntBASIC24.58■■□□□ 1.53
CHD1O14646 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD1O14646 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CHD1O14646 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC24.58■■□□□ 1.53
CHD1O14646 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC24.58■■□□□ 1.53
CHD1O14646 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CHD1O14646 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD1O14646 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC24.58■■□□□ 1.53
CHD1O14646 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHD1O14646 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
CHD1O14646 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
CHD1O14646 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CHD1O14646 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
CHD1O14646 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CHD1O14646 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CHD1O14646 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CHD1O14646 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CHD1O14646 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CHD1O14646 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC24.58■■□□□ 1.52
CHD1O14646 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.52
CHD1O14646 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC24.58■■□□□ 1.52
CHD1O14646 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CHD1O14646 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
CHD1O14646 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC24.57■■□□□ 1.52
CHD1O14646 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CHD1O14646 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CHD1O14646 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHD1O14646 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHD1O14646 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHD1O14646 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC24.57■■□□□ 1.52
CHD1O14646 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC24.57■■□□□ 1.52
CHD1O14646 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC24.57■■□□□ 1.52
CHD1O14646 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CHD1O14646 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC24.57■■□□□ 1.52
CHD1O14646 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHD1O14646 AC087289.5-201ENST00000586076 3175 ntBASIC24.57■■□□□ 1.52
CHD1O14646 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHD1O14646 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHD1O14646 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHD1O14646 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC24.57■■□□□ 1.52
CHD1O14646 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC24.56■■□□□ 1.52
CHD1O14646 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.56■■□□□ 1.52
CHD1O14646 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CHD1O14646 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC24.56■■□□□ 1.52
CHD1O14646 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHD1O14646 AC106886.4-201ENST00000623557 2502 ntBASIC24.56■■□□□ 1.52
CHD1O14646 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHD1O14646 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHD1O14646 MBP-201ENST00000354542 575 ntTSL 2 BASIC24.56■■□□□ 1.52
CHD1O14646 AC004522.1-201ENST00000419978 654 ntBASIC24.56■■□□□ 1.52
CHD1O14646 AC092638.2-201ENST00000441105 947 ntBASIC24.56■■□□□ 1.52
CHD1O14646 AC012441.2-201ENST00000444843 739 ntBASIC24.56■■□□□ 1.52
CHD1O14646 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC24.56■■□□□ 1.52
CHD1O14646 THY1-209ENST00000580275 578 ntTSL 3 BASIC24.56■■□□□ 1.52
CHD1O14646 AC011477.6-201ENST00000604980 1927 ntBASIC24.56■■□□□ 1.52
CHD1O14646 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC24.56■■□□□ 1.52
CHD1O14646 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC24.56■■□□□ 1.52
CHD1O14646 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHD1O14646 ME2P1-201ENST00000426028 1970 ntBASIC24.56■■□□□ 1.52
CHD1O14646 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CHD1O14646 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC24.56■■□□□ 1.52
CHD1O14646 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CHD1O14646 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHD1O14646 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CHD1O14646 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHD1O14646 AC093909.3-201ENST00000504783 336 ntBASIC24.55■■□□□ 1.52
CHD1O14646 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC24.55■■□□□ 1.52
CHD1O14646 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC24.55■■□□□ 1.52
CHD1O14646 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC24.55■■□□□ 1.52
CHD1O14646 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHD1O14646 USP4-203ENST00000415188 1454 ntTSL 3 BASIC24.55■■□□□ 1.52
CHD1O14646 AC006058.4-201ENST00000624016 1670 ntBASIC24.55■■□□□ 1.52
CHD1O14646 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
CHD1O14646 AC084364.1-201ENST00000551967 1556 ntBASIC24.55■■□□□ 1.52
CHD1O14646 CYP4F23P-201ENST00000593402 1579 ntBASIC24.55■■□□□ 1.52
CHD1O14646 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHD1O14646 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
CHD1O14646 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC24.55■■□□□ 1.52
CHD1O14646 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHD1O14646 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHD1O14646 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC24.55■■□□□ 1.52
CHD1O14646 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC24.55■■□□□ 1.52
CHD1O14646 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC24.55■■□□□ 1.52
CHD1O14646 AC093752.3-201ENST00000567343 901 ntBASIC24.55■■□□□ 1.52
CHD1O14646 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC24.55■■□□□ 1.52
CHD1O14646 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
CHD1O14646 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CHD1O14646 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHD1O14646 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC24.54■■□□□ 1.52
CHD1O14646 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHD1O14646 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
CHD1O14646 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC24.54■■□□□ 1.52
CHD1O14646 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms