Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 TCAF2P1-201ENST00000291129 2421 ntBASIC13.88□□□□□ -0.19
NPIPB4C9JG80 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 AC241585.1-201ENST00000433527 519 ntBASIC13.88□□□□□ -0.19
NPIPB4C9JG80 AC009477.1-201ENST00000452936 217 ntBASIC13.88□□□□□ -0.19
NPIPB4C9JG80 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 AC093028.1-201ENST00000622998 982 ntBASIC13.88□□□□□ -0.19
NPIPB4C9JG80 AL109936.8-201ENST00000641772 604 ntBASIC13.88□□□□□ -0.19
NPIPB4C9JG80 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 ZBED1P1-201ENST00000502364 1930 ntBASIC13.88□□□□□ -0.19
NPIPB4C9JG80 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPB4C9JG80 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 LINC01101-201ENST00000622953 1884 ntBASIC13.87□□□□□ -0.19
NPIPB4C9JG80 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 AC139530.3-201ENST00000620344 690 ntBASIC13.87□□□□□ -0.19
NPIPB4C9JG80 AL590560.3-201ENST00000623350 461 ntBASIC13.87□□□□□ -0.19
NPIPB4C9JG80 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
NPIPB4C9JG80 AF228730.6-201ENST00000641497 218 ntBASIC13.87□□□□□ -0.19
NPIPB4C9JG80 AC084121.3-201ENST00000641716 218 ntBASIC13.87□□□□□ -0.19
NPIPB4C9JG80 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms