Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 AC018695.6-201ENST00000614011 534 ntBASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 AC138466.3-201ENST00000619983 221 ntBASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 PLS3-210ENST00000626746 216 ntTSL 4 BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 AC008723.1-201ENST00000506922 207 ntBASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 AC022616.1-201ENST00000518688 554 ntBASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 AC018892.3-201ENST00000623986 2499 ntBASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.9■□□□□ 0.46
TMEM88BA6NKF7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TMEM88BA6NKF7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TMEM88BA6NKF7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 RPL18AP3-201ENST00000462885 528 ntBASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 HLA-J-204ENST00000495278 958 ntBASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 FAM86KP-201ENST00000509817 987 ntBASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 EIF5AP2-201ENST00000585668 1047 ntBASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 AC092299.1-201ENST00000632679 757 ntBASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 AL158070.2-201ENST00000623713 1621 ntBASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
TMEM88BA6NKF7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM88BA6NKF7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms