Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 KRT17P7-201ENST00000451704 1104 ntBASIC16.02■□□□□ 0.16
CAPN8A6NHC0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 RN7SL618P-201ENST00000477850 296 ntBASIC16.02■□□□□ 0.16
CAPN8A6NHC0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 AL512361.1-201ENST00000554200 418 ntBASIC16.02■□□□□ 0.16
CAPN8A6NHC0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 AL844908.2-201ENST00000609461 460 ntBASIC16.02■□□□□ 0.16
CAPN8A6NHC0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 MIR6069-201ENST00000620069 79 ntBASIC16.02■□□□□ 0.16
CAPN8A6NHC0 AL033527.5-202ENST00000641632 1098 ntBASIC16.02■□□□□ 0.16
CAPN8A6NHC0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN8A6NHC0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN8A6NHC0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 AC010336.2-201ENST00000564226 506 ntBASIC16.01■□□□□ 0.15
CAPN8A6NHC0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPN8A6NHC0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16■□□□□ 0.15
CAPN8A6NHC0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CAPN8A6NHC0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16■□□□□ 0.15
CAPN8A6NHC0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16■□□□□ 0.15
CAPN8A6NHC0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16■□□□□ 0.15
CAPN8A6NHC0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
CAPN8A6NHC0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CAPN8A6NHC0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CAPN8A6NHC0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN8A6NHC0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16■□□□□ 0.15
CAPN8A6NHC0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16■□□□□ 0.15
CAPN8A6NHC0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16■□□□□ 0.15
CAPN8A6NHC0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms