Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 AC140113.2-201ENST00000604370 208 ntBASIC16.73■□□□□ 0.27
RCCD1A6NED2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
RCCD1A6NED2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RCCD1A6NED2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 AC079140.1-201ENST00000508039 487 ntBASIC16.72■□□□□ 0.27
RCCD1A6NED2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 AC084364.1-201ENST00000551967 1556 ntBASIC16.72■□□□□ 0.27
RCCD1A6NED2 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RCCD1A6NED2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RCCD1A6NED2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.71■□□□□ 0.27
RCCD1A6NED2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.71■□□□□ 0.27
RCCD1A6NED2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.71■□□□□ 0.27
RCCD1A6NED2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 CICP4-201ENST00000447359 2812 ntBASIC16.71■□□□□ 0.27
RCCD1A6NED2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RCCD1A6NED2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.71■□□□□ 0.27
RCCD1A6NED2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.71■□□□□ 0.27
RCCD1A6NED2 FAM58CP-201ENST00000435741 640 ntBASIC16.71■□□□□ 0.27
RCCD1A6NED2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.71■□□□□ 0.27
RCCD1A6NED2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 RN7SL121P-201ENST00000584223 273 ntBASIC16.71■□□□□ 0.27
RCCD1A6NED2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.71■□□□□ 0.27
RCCD1A6NED2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.71■□□□□ 0.27
RCCD1A6NED2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.71■□□□□ 0.27
RCCD1A6NED2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RCCD1A6NED2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RCCD1A6NED2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RCCD1A6NED2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RCCD1A6NED2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms