Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AL365330.1-201ENST00000607459 531 ntBASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC004233.3-201ENST00000607794 1269 ntBASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.7□□□□□ -0.38
TCRBV4S1A1TA0A5B7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC022144.1-201ENST00000602255 1580 ntBASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC093724.1-201ENST00000448659 1027 ntBASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC004890.2-204ENST00000481968 304 ntBASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC026979.3-201ENST00000607315 403 ntBASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC009118.2-201ENST00000613275 655 ntBASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms