Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 OR2I1P-209ENST00000641730 5365 ntBASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 AC004987.2-201ENST00000395959 1148 ntBASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 AC018529.1-201ENST00000613063 361 ntBASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 SBF1P1-201ENST00000444527 5631 ntBASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 AP005117.1-202ENST00000581724 1908 ntBASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 AL691432.1-201ENST00000596308 1422 ntBASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC11.93□□□□□ -0.5
HLA-DRB4X5D2U9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 OR2I1P-210ENST00000642037 4691 ntBASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 CD81-202ENST00000381036 880 ntTSL 3 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 GPS2P2-201ENST00000430745 888 ntBASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 SPDYE14P-201ENST00000442619 822 ntBASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms