Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.68■□□□□ 0.58
HPS5Q9UPZ3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 AL139384.1-201ENST00000612143 3047 ntBASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 CLK3P2-201ENST00000427566 1453 ntBASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 AC097359.3-201ENST00000603982 1210 ntBASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 U62317.3-201ENST00000608319 855 ntBASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 AC015967.2-201ENST00000624092 234 ntBASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 AC006435.4-201ENST00000625037 234 ntBASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 AL356737.1-201ENST00000634391 234 ntBASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HPS5Q9UPZ3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 AC092850.2-201ENST00000623821 2697 ntBASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HPS5Q9UPZ3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 CALR4P-201ENST00000431943 946 ntBASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 AC006033.1-201ENST00000440505 426 ntBASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 HNRNPUP1-201ENST00000554987 333 ntBASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 AL022328.1-201ENST00000610050 478 ntBASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HPS5Q9UPZ3 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.64■□□□□ 0.58
HPS5Q9UPZ3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.64■□□□□ 0.58
HPS5Q9UPZ3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.64■□□□□ 0.58
HPS5Q9UPZ3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms