Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.69■□□□□ 0.58
CLIP2Q9UDT6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 SLC7A15P-201ENST00000424028 1363 ntBASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 AL391825.1-201ENST00000457671 1364 ntBASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 Z97205.2-201ENST00000564697 1639 ntBASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 DGCR5-201ENST00000399539 862 ntBASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 AC087499.6-201ENST00000411576 835 ntBASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 GAPDHP21-201ENST00000450301 1010 ntBASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 AC092337.1-201ENST00000568699 1129 ntBASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 LINC01115-203ENST00000606068 577 ntBASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CLIP2Q9UDT6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 NME2P1-201ENST00000426182 414 ntBASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLIP2Q9UDT6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms