Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 MRPL3P1-201ENST00000400109 1033 ntBASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 AL136982.4-201ENST00000437689 1740 ntBASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 KRT18P2-201ENST00000447938 1258 ntBASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 AL139010.1-201ENST00000454878 894 ntBASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 RNA5SP410-201ENST00000516285 106 ntBASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 AC099522.2-201ENST00000607001 744 ntBASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 AC008267.7-201ENST00000624570 1194 ntBASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC10.88□□□□□ -0.67
CDC42SE2Q9NRR3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 FAM220BP-201ENST00000377689 816 ntBASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 AC034105.1-201ENST00000563488 319 ntBASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 AC145285.3-201ENST00000564603 959 ntBASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 AC027307.2-201ENST00000591252 911 ntBASIC10.87□□□□□ -0.67
CDC42SE2Q9NRR3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms