Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
VTA1Q9NP79 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.46■□□□□ 0.39
VTA1Q9NP79 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTA1Q9NP79 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.46■□□□□ 0.39
VTA1Q9NP79 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.46■□□□□ 0.39
VTA1Q9NP79 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
VTA1Q9NP79 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
VTA1Q9NP79 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
VTA1Q9NP79 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
VTA1Q9NP79 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
VTA1Q9NP79 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.45■□□□□ 0.38
VTA1Q9NP79 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTA1Q9NP79 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VTA1Q9NP79 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTA1Q9NP79 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTA1Q9NP79 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
VTA1Q9NP79 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VTA1Q9NP79 CD8B2-202ENST00000417670 633 ntBASIC17.45■□□□□ 0.38
VTA1Q9NP79 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.45■□□□□ 0.38
VTA1Q9NP79 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTA1Q9NP79 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTA1Q9NP79 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.45■□□□□ 0.38
VTA1Q9NP79 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.45■□□□□ 0.38
VTA1Q9NP79 AC243960.2-201ENST00000600996 747 ntBASIC17.45■□□□□ 0.38
VTA1Q9NP79 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.45■□□□□ 0.38
VTA1Q9NP79 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.45■□□□□ 0.38
VTA1Q9NP79 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
VTA1Q9NP79 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
VTA1Q9NP79 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTA1Q9NP79 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTA1Q9NP79 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTA1Q9NP79 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTA1Q9NP79 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
VTA1Q9NP79 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 LINC02447-202ENST00000501888 2146 ntBASIC17.44■□□□□ 0.38
VTA1Q9NP79 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 AC006453.4-201ENST00000636949 1252 ntBASIC17.44■□□□□ 0.38
VTA1Q9NP79 PRSS30P-206ENST00000641773 873 ntBASIC17.44■□□□□ 0.38
VTA1Q9NP79 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTA1Q9NP79 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 PCDHA14-201ENST00000506751 2298 ntBASIC17.44■□□□□ 0.38
VTA1Q9NP79 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.44■□□□□ 0.38
VTA1Q9NP79 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VTA1Q9NP79 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VTA1Q9NP79 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTA1Q9NP79 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VTA1Q9NP79 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.43■□□□□ 0.38
VTA1Q9NP79 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTA1Q9NP79 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.43■□□□□ 0.38
VTA1Q9NP79 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
VTA1Q9NP79 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VTA1Q9NP79 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
VTA1Q9NP79 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTA1Q9NP79 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTA1Q9NP79 MIR326-201ENST00000362220 95 ntBASIC17.43■□□□□ 0.38
VTA1Q9NP79 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VTA1Q9NP79 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.43■□□□□ 0.38
VTA1Q9NP79 MIR1247-201ENST00000408206 136 ntBASIC17.43■□□□□ 0.38
VTA1Q9NP79 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VTA1Q9NP79 GOLGA2P4-201ENST00000441462 777 ntBASIC17.43■□□□□ 0.38
VTA1Q9NP79 Z93015.1-201ENST00000451718 390 ntBASIC17.43■□□□□ 0.38
VTA1Q9NP79 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.43■□□□□ 0.38
VTA1Q9NP79 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.43■□□□□ 0.38
VTA1Q9NP79 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.43■□□□□ 0.38
VTA1Q9NP79 RN7SL48P-201ENST00000579283 293 ntBASIC17.43■□□□□ 0.38
VTA1Q9NP79 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.43■□□□□ 0.38
VTA1Q9NP79 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.43■□□□□ 0.38
VTA1Q9NP79 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms