Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 MEP1AP4-201ENST00000423244 1087 ntBASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 AL162727.3-201ENST00000635661 2787 ntBASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP13A1Q9HD20 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 TOMM22P5-201ENST00000416399 439 ntBASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 AL353779.1-201ENST00000434793 351 ntBASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 CRB3P1-201ENST00000449338 276 ntBASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 AC055876.2-201ENST00000531834 546 ntBASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 SLC7A15P-201ENST00000424028 1363 ntBASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP13A1Q9HD20 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATP13A1Q9HD20 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.08■□□□□ 0.17
ATP13A1Q9HD20 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATP13A1Q9HD20 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATP13A1Q9HD20 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATP13A1Q9HD20 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 AC087499.6-201ENST00000411576 835 ntBASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 AL158212.4-201ENST00000624062 1286 ntBASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms