Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 AC092580.3-201ENST00000430932 139 ntBASIC13.83□□□□□ -0.2
CDH20Q9HBT6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 EEF1DP4-201ENST00000446006 880 ntBASIC13.83□□□□□ -0.2
CDH20Q9HBT6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 AL033527.5-202ENST00000641632 1098 ntBASIC13.83□□□□□ -0.2
CDH20Q9HBT6 AC010491.1-201ENST00000563101 2797 ntBASIC13.83□□□□□ -0.2
CDH20Q9HBT6 AC132872.4-202ENST00000622924 2756 ntBASIC13.83□□□□□ -0.2
CDH20Q9HBT6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH20Q9HBT6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 AZGP1P1-201ENST00000411909 902 ntBASIC13.82□□□□□ -0.2
CDH20Q9HBT6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH20Q9HBT6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms