Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.05■□□□□ -0
BRF2Q9HAW0 TSEN15P1-201ENST00000423257 515 ntBASIC15.05■□□□□ -0
BRF2Q9HAW0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.05■□□□□ -0
BRF2Q9HAW0 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.05■□□□□ -0
BRF2Q9HAW0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.05■□□□□ -0
BRF2Q9HAW0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.05■□□□□ -0
BRF2Q9HAW0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 SLED1-202ENST00000512051 380 ntBASIC15.05■□□□□ -0
BRF2Q9HAW0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.05■□□□□ -0
BRF2Q9HAW0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.05■□□□□ -0
BRF2Q9HAW0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
BRF2Q9HAW0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
BRF2Q9HAW0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.05■□□□□ -0
BRF2Q9HAW0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.05■□□□□ -0
BRF2Q9HAW0 AL596442.2-201ENST00000610240 980 ntBASIC15.05■□□□□ -0
BRF2Q9HAW0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.05■□□□□ -0
BRF2Q9HAW0 TSPY26P-202ENST00000565928 3884 ntBASIC15.05■□□□□ -0
BRF2Q9HAW0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.05■□□□□ -0
BRF2Q9HAW0 FO538757.1-201ENST00000623083 1397 ntBASIC15.05■□□□□ -0
BRF2Q9HAW0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.05■□□□□ -0
BRF2Q9HAW0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.05■□□□□ -0
BRF2Q9HAW0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.05■□□□□ -0
BRF2Q9HAW0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.05■□□□□ -0
BRF2Q9HAW0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
BRF2Q9HAW0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
BRF2Q9HAW0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.05■□□□□ -0
BRF2Q9HAW0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.05■□□□□ -0
BRF2Q9HAW0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
BRF2Q9HAW0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
BRF2Q9HAW0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.04■□□□□ -0
BRF2Q9HAW0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.04■□□□□ -0
BRF2Q9HAW0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
BRF2Q9HAW0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.04■□□□□ -0
BRF2Q9HAW0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.04■□□□□ -0
BRF2Q9HAW0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.04■□□□□ -0
BRF2Q9HAW0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
BRF2Q9HAW0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.04■□□□□ -0
BRF2Q9HAW0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
BRF2Q9HAW0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
BRF2Q9HAW0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.04■□□□□ -0
BRF2Q9HAW0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
BRF2Q9HAW0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
BRF2Q9HAW0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.04■□□□□ -0
BRF2Q9HAW0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
BRF2Q9HAW0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
BRF2Q9HAW0 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.04■□□□□ -0
BRF2Q9HAW0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.04■□□□□ -0
BRF2Q9HAW0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 RPL37AP1-201ENST00000412502 279 ntBASIC15.04■□□□□ -0
BRF2Q9HAW0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.04■□□□□ -0
BRF2Q9HAW0 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.04■□□□□ -0
BRF2Q9HAW0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.04■□□□□ -0
BRF2Q9HAW0 AC109322.1-201ENST00000524499 1264 ntBASIC15.04■□□□□ -0
BRF2Q9HAW0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.04■□□□□ -0
BRF2Q9HAW0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.04■□□□□ -0
BRF2Q9HAW0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.04■□□□□ -0
BRF2Q9HAW0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.04■□□□□ -0
BRF2Q9HAW0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
BRF2Q9HAW0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.04■□□□□ -0
BRF2Q9HAW0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.04■□□□□ -0
BRF2Q9HAW0 AC015911.4-201ENST00000588022 1070 ntBASIC15.04■□□□□ -0
BRF2Q9HAW0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.04■□□□□ -0
BRF2Q9HAW0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.04■□□□□ -0
BRF2Q9HAW0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
BRF2Q9HAW0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.04■□□□□ -0
BRF2Q9HAW0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.04■□□□□ -0
BRF2Q9HAW0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
BRF2Q9HAW0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.04■□□□□ -0
BRF2Q9HAW0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
BRF2Q9HAW0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
BRF2Q9HAW0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.04■□□□□ -0
BRF2Q9HAW0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.04■□□□□ -0
BRF2Q9HAW0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms