Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 ACTG1P14-201ENST00000446382 1122 ntBASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 AC091951.1-201ENST00000512854 2465 ntBASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 AC140113.2-201ENST00000604370 208 ntBASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 AC092865.6-201ENST00000642101 219 ntBASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 AC007326.2-201ENST00000624224 7579 ntBASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 ADH5P3-201ENST00000433842 1137 ntBASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 AP000842.3-202ENST00000569238 1080 ntBASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 AL450472.2-201ENST00000603663 1156 ntBASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 AC106881.1-201ENST00000605849 3329 ntBASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
POLR2J3Q9H1A7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 KRT8P37-201ENST00000451609 1420 ntBASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 FDX1P1-201ENST00000449115 551 ntBASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 MIR4313-201ENST00000580760 101 ntBASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
POLR2J3Q9H1A7 AC026120.1-201ENST00000611536 926 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms