Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COMMD4Q9H0A8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.98□□□□□ -0.17
COMMD4Q9H0A8 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
COMMD4Q9H0A8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
COMMD4Q9H0A8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 AC127383.1-201ENST00000444697 1800 ntBASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 ST20-AS1-201ENST00000560255 4223 ntBASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 AC026396.1-201ENST00000419388 421 ntBASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 AL645939.2-201ENST00000427340 991 ntBASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 AC098859.1-201ENST00000502915 1238 ntBASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 AL049840.3-201ENST00000602669 611 ntBASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 AL691432.1-201ENST00000596308 1422 ntBASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
COMMD4Q9H0A8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 REXO1L1P-202ENST00000608646 1974 ntBASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 BCAR1-209ENST00000546196 1340 ntBASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 RNA5SP419-201ENST00000515908 135 ntBASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 AL662844.1-201ENST00000546340 181 ntBASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 AC116407.3-201ENST00000623905 1129 ntBASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 AC007292.2-201ENST00000593524 1812 ntBASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COMMD4Q9H0A8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
COMMD4Q9H0A8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms