Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 CICP14-201ENST00000629111 2732 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 MED20-203ENST00000409060 815 ntTSL 2 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 LHFPL3-AS1-202ENST00000416376 866 ntTSL 3 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 ATP6V0CP3-201ENST00000417255 467 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 UPK3BP1-201ENST00000428678 509 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 TRIM60P13-201ENST00000432350 1283 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AC140658.5-201ENST00000438532 169 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 LLPH-202ENST00000446587 1177 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 HCG4B-203ENST00000450128 991 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AC108751.1-201ENST00000490852 363 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 PRYP6-201ENST00000514804 343 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 SNRPGP1-201ENST00000553864 222 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AC096734.2-201ENST00000562054 433 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 PRELID1P1-202ENST00000567272 903 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AL138918.1-201ENST00000568306 659 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 MIR4751-201ENST00000578027 74 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AC011458.1-201ENST00000604034 617 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 RPL21P136-201ENST00000605378 396 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 IFNL4P1-201ENST00000607083 540 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AC006963.1-201ENST00000624003 1052 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 FAM215A-202ENST00000632077 792 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 FOXO1B-201ENST00000504678 1527 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 MROH4P-201ENST00000431302 1578 ntBASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
KRTAP3-1Q9BYR8 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms