Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 AC126365.1-201ENST00000578585 1514 ntBASIC13.34□□□□□ -0.27
HDHD3Q9BSH5 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HDHD3Q9BSH5 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HDHD3Q9BSH5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.33□□□□□ -0.27
HDHD3Q9BSH5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
HDHD3Q9BSH5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.33□□□□□ -0.27
HDHD3Q9BSH5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.33□□□□□ -0.27
HDHD3Q9BSH5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
HDHD3Q9BSH5 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.33□□□□□ -0.27
HDHD3Q9BSH5 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
HDHD3Q9BSH5 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 AL365209.1-201ENST00000624418 6473 ntBASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 AC026748.1-201ENST00000624349 3251 ntBASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 AC004987.2-201ENST00000395959 1148 ntBASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 AC142381.1-201ENST00000426099 345 ntBASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 KRT126P-201ENST00000549467 1181 ntBASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.33□□□□□ -0.28
HDHD3Q9BSH5 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 LINC01101-201ENST00000622953 1884 ntBASIC13.32□□□□□ -0.28
HDHD3Q9BSH5 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms