Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 SOCS2P1-201ENST00000417727 557 ntBASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 INE1-201ENST00000456273 945 ntBASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
CDK5RAP1Q96SZ6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 KRT8P22-201ENST00000562317 1415 ntBASIC16.28■□□□□ 0.2
CDK5RAP1Q96SZ6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 AC007389.4-201ENST00000454674 793 ntBASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 AC093813.1-201ENST00000605066 256 ntBASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
CDK5RAP1Q96SZ6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms