Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
NBPF4Q96M43 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.47■□□□□ 0.87
NBPF4Q96M43 HARS-202ENST00000415192 1401 ntTSL 2 BASIC20.47■□□□□ 0.87
NBPF4Q96M43 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NBPF4Q96M43 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NBPF4Q96M43 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NBPF4Q96M43 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
NBPF4Q96M43 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NBPF4Q96M43 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NBPF4Q96M43 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NBPF4Q96M43 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
NBPF4Q96M43 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NBPF4Q96M43 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NBPF4Q96M43 OARD1-212ENST00000482515 832 ntTSL 2 BASIC20.47■□□□□ 0.87
NBPF4Q96M43 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
NBPF4Q96M43 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NBPF4Q96M43 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.47■□□□□ 0.87
NBPF4Q96M43 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
NBPF4Q96M43 AP006547.1-201ENST00000563435 692 ntBASIC20.47■□□□□ 0.87
NBPF4Q96M43 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC20.47■□□□□ 0.87
NBPF4Q96M43 RN7SL48P-201ENST00000579283 293 ntBASIC20.47■□□□□ 0.87
NBPF4Q96M43 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC20.47■□□□□ 0.87
NBPF4Q96M43 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NBPF4Q96M43 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NBPF4Q96M43 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NBPF4Q96M43 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NBPF4Q96M43 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NBPF4Q96M43 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NBPF4Q96M43 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NBPF4Q96M43 AC015818.8-201ENST00000587907 1519 ntBASIC20.47■□□□□ 0.87
NBPF4Q96M43 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
NBPF4Q96M43 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NBPF4Q96M43 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NBPF4Q96M43 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.46■□□□□ 0.87
NBPF4Q96M43 AMT-224ENST00000635808 1610 ntTSL 5 BASIC20.46■□□□□ 0.87
NBPF4Q96M43 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NBPF4Q96M43 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NBPF4Q96M43 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NBPF4Q96M43 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NBPF4Q96M43 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NBPF4Q96M43 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NBPF4Q96M43 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NBPF4Q96M43 MTX1P1-201ENST00000440904 838 ntBASIC20.46■□□□□ 0.87
NBPF4Q96M43 CNN2P10-201ENST00000443067 918 ntBASIC20.46■□□□□ 0.87
NBPF4Q96M43 PFN2-205ENST00000461868 613 ntTSL 2 BASIC20.46■□□□□ 0.87
NBPF4Q96M43 AC104982.3-201ENST00000581995 514 ntBASIC20.46■□□□□ 0.87
NBPF4Q96M43 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC20.46■□□□□ 0.87
NBPF4Q96M43 EEF1DP1-201ENST00000585891 896 ntBASIC20.46■□□□□ 0.87
NBPF4Q96M43 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NBPF4Q96M43 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
NBPF4Q96M43 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NBPF4Q96M43 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
NBPF4Q96M43 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NBPF4Q96M43 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NBPF4Q96M43 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.46■□□□□ 0.87
NBPF4Q96M43 AC007787.1-201ENST00000588095 1583 ntBASIC20.46■□□□□ 0.87
NBPF4Q96M43 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC20.46■□□□□ 0.87
NBPF4Q96M43 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.46■□□□□ 0.87
NBPF4Q96M43 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NBPF4Q96M43 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC20.45■□□□□ 0.87
NBPF4Q96M43 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.45■□□□□ 0.87
NBPF4Q96M43 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NBPF4Q96M43 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 AC020916.1-201ENST00000587762 1774 ntBASIC20.45■□□□□ 0.86
NBPF4Q96M43 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NBPF4Q96M43 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NBPF4Q96M43 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 CALR4P-201ENST00000431943 946 ntBASIC20.45■□□□□ 0.86
NBPF4Q96M43 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NBPF4Q96M43 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NBPF4Q96M43 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NBPF4Q96M43 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NBPF4Q96M43 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 AC090340.1-201ENST00000620778 4980 ntBASIC20.45■□□□□ 0.86
NBPF4Q96M43 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
NBPF4Q96M43 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NBPF4Q96M43 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NBPF4Q96M43 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.44■□□□□ 0.86
NBPF4Q96M43 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NBPF4Q96M43 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.44■□□□□ 0.86
NBPF4Q96M43 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NBPF4Q96M43 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC20.44■□□□□ 0.86
NBPF4Q96M43 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NBPF4Q96M43 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NBPF4Q96M43 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NBPF4Q96M43 AL139094.1-201ENST00000405549 1188 ntBASIC20.44■□□□□ 0.86
NBPF4Q96M43 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC20.44■□□□□ 0.86
NBPF4Q96M43 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms