Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF34Q969K3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF34Q969K3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF34Q969K3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
RNF34Q969K3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF34Q969K3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF34Q969K3 MYO15B-237ENST00000642007 4893 ntBASIC16.5■□□□□ 0.23
RNF34Q969K3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF34Q969K3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RNF34Q969K3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF34Q969K3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF34Q969K3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF34Q969K3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF34Q969K3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF34Q969K3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF34Q969K3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF34Q969K3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF34Q969K3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF34Q969K3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF34Q969K3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF34Q969K3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF34Q969K3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF34Q969K3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF34Q969K3 BCRP1-201ENST00000444246 691 ntBASIC16.49■□□□□ 0.23
RNF34Q969K3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RNF34Q969K3 AC009477.1-201ENST00000452936 217 ntBASIC16.49■□□□□ 0.23
RNF34Q969K3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF34Q969K3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RNF34Q969K3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RNF34Q969K3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF34Q969K3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF34Q969K3 TIMM17BP1-201ENST00000545713 516 ntBASIC16.49■□□□□ 0.23
RNF34Q969K3 AC009407.1-201ENST00000568958 598 ntBASIC16.49■□□□□ 0.23
RNF34Q969K3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.49■□□□□ 0.23
RNF34Q969K3 AC025048.3-201ENST00000590609 569 ntBASIC16.49■□□□□ 0.23
RNF34Q969K3 AC005702.4-201ENST00000618393 416 ntBASIC16.49■□□□□ 0.23
RNF34Q969K3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF34Q969K3 AC097376.2-205ENST00000610159 5334 ntBASIC16.49■□□□□ 0.23
RNF34Q969K3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RNF34Q969K3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF34Q969K3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RNF34Q969K3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF34Q969K3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF34Q969K3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF34Q969K3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF34Q969K3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RNF34Q969K3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RNF34Q969K3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF34Q969K3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF34Q969K3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF34Q969K3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RNF34Q969K3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF34Q969K3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF34Q969K3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
RNF34Q969K3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RNF34Q969K3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF34Q969K3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF34Q969K3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF34Q969K3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF34Q969K3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF34Q969K3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF34Q969K3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF34Q969K3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RNF34Q969K3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF34Q969K3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.48■□□□□ 0.23
RNF34Q969K3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF34Q969K3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
RNF34Q969K3 TARDBPP1-201ENST00000442013 1203 ntBASIC16.48■□□□□ 0.23
RNF34Q969K3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF34Q969K3 TSPY16P-201ENST00000449843 468 ntBASIC16.48■□□□□ 0.23
RNF34Q969K3 UGT1A2P-201ENST00000454886 866 ntBASIC16.48■□□□□ 0.23
RNF34Q969K3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF34Q969K3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF34Q969K3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF34Q969K3 MIR3197-201ENST00000582241 73 ntBASIC16.48■□□□□ 0.23
RNF34Q969K3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF34Q969K3 AC074044.1-201ENST00000609673 707 ntBASIC16.48■□□□□ 0.23
RNF34Q969K3 AC008738.7-201ENST00000609744 511 ntBASIC16.48■□□□□ 0.23
RNF34Q969K3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF34Q969K3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RNF34Q969K3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RNF34Q969K3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF34Q969K3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF34Q969K3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms