Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ATP2A3Q93084 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A3Q93084 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.64■□□□□ 0.26
ATP2A3Q93084 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 SPDYE18-201ENST00000510091 1050 ntBASIC16.64■□□□□ 0.25
ATP2A3Q93084 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 SRD5A3P1-201ENST00000603021 949 ntBASIC16.64■□□□□ 0.25
ATP2A3Q93084 AL109936.8-201ENST00000641772 604 ntBASIC16.64■□□□□ 0.25
ATP2A3Q93084 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.64■□□□□ 0.25
ATP2A3Q93084 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 AC024909.3-201ENST00000611513 2257 ntBASIC16.64■□□□□ 0.25
ATP2A3Q93084 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A3Q93084 SLC7A15P-201ENST00000424028 1363 ntBASIC16.64■□□□□ 0.25
ATP2A3Q93084 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP2A3Q93084 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ATP2A3Q93084 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2A3Q93084 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2A3Q93084 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ATP2A3Q93084 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
ATP2A3Q93084 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2A3Q93084 DGCR5-201ENST00000399539 862 ntBASIC16.63■□□□□ 0.25
ATP2A3Q93084 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2A3Q93084 POU5F1P6-201ENST00000466990 990 ntBASIC16.63■□□□□ 0.25
ATP2A3Q93084 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2A3Q93084 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.63■□□□□ 0.25
ATP2A3Q93084 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2A3Q93084 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP2A3Q93084 AC004461.2-201ENST00000629517 803 ntBASIC16.63■□□□□ 0.25
ATP2A3Q93084 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ATP2A3Q93084 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ATP2A3Q93084 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ATP2A3Q93084 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A3Q93084 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2A3Q93084 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.62■□□□□ 0.25
ATP2A3Q93084 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATP2A3Q93084 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms