Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 LLPH-202ENST00000446587 1177 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 RN7SL519P-201ENST00000497925 288 ntBASIC9.6□□□□□ -0.87
SVIPQ8NHG7 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 AC079777.1-201ENST00000623836 1953 ntBASIC9.6□□□□□ -0.87
SVIPQ8NHG7 TRAFD1-202ENST00000412615 2697 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 CC2D2A-203ENST00000438599 1673 ntTSL 5 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 AC097374.1-202ENST00000582835 3329 ntTSL 2 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 DDX11-202ENST00000350437 3724 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 FCGR1A-201ENST00000369168 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 NRF1-204ENST00000393230 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 NEK6-215ENST00000546191 2580 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SVIPQ8NHG7 CICP26-201ENST00000425003 2448 ntBASIC9.6□□□□□ -0.87
SVIPQ8NHG7 CTCFL-202ENST00000371196 3491 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 DDX11-201ENST00000228264 3717 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 PJA1-204ENST00000374584 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 GPR50-201ENST00000218316 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 TCEA3-203ENST00000450454 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 AC127383.1-201ENST00000444697 1800 ntBASIC9.59□□□□□ -0.87
SVIPQ8NHG7 IL21R-202ENST00000395754 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 AC079414.2-201ENST00000567157 1104 ntBASIC9.59□□□□□ -0.87
SVIPQ8NHG7 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 CHRNA7-224ENST00000637183 2912 ntTSL 5 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 AL035555.1-201ENST00000404462 1790 ntBASIC9.59□□□□□ -0.87
SVIPQ8NHG7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 ZNF234-204ENST00000592437 2292 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 AC092645.1-201ENST00000624058 2272 ntBASIC9.59□□□□□ -0.87
SVIPQ8NHG7 IRF5-203ENST00000402030 2786 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 PAQR7-201ENST00000374296 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 ORAI2-210ENST00000611770 10679 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 LINC02068-201ENST00000418839 3212 ntTSL 2 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 ITIH4-212ENST00000485816 2990 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 GOLGA8EP-201ENST00000530246 1959 ntBASIC9.59□□□□□ -0.87
SVIPQ8NHG7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 TCF4-254ENST00000626584 1701 ntTSL 5 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 GPR17-206ENST00000544369 2598 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
SVIPQ8NHG7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.88
SVIPQ8NHG7 ACTG1P9-201ENST00000457622 2658 ntBASIC9.59□□□□□ -0.88
SVIPQ8NHG7 CYP1A1-209ENST00000612821 2402 ntTSL 5 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 EPB41L2-216ENST00000527411 4186 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 PES1-205ENST00000405677 2708 ntTSL 2 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms