Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 TERF1P1-201ENST00000311003 1181 ntBASIC11.82□□□□□ -0.52
NUP35Q8NFH5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 AC113347.1-201ENST00000413321 391 ntBASIC11.82□□□□□ -0.52
NUP35Q8NFH5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 AK4P3-201ENST00000418260 669 ntBASIC11.82□□□□□ -0.52
NUP35Q8NFH5 POM121L3P-201ENST00000419331 1163 ntBASIC11.82□□□□□ -0.52
NUP35Q8NFH5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 AL671277.2-201ENST00000458060 996 ntBASIC11.82□□□□□ -0.52
NUP35Q8NFH5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 AC021097.1-201ENST00000607902 574 ntBASIC11.82□□□□□ -0.52
NUP35Q8NFH5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
NUP35Q8NFH5 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 AC012569.1-201ENST00000591191 1524 ntBASIC11.81□□□□□ -0.52
NUP35Q8NFH5 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 CICP20-201ENST00000443330 2801 ntBASIC11.81□□□□□ -0.52
NUP35Q8NFH5 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.81□□□□□ -0.52
NUP35Q8NFH5 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 AC097359.2-201ENST00000604992 2389 ntBASIC11.81□□□□□ -0.52
NUP35Q8NFH5 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.81□□□□□ -0.52
NUP35Q8NFH5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 BX276092.5-203ENST00000456199 560 ntBASIC11.81□□□□□ -0.52
NUP35Q8NFH5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 AC091076.1-201ENST00000610741 619 ntBASIC11.81□□□□□ -0.52
NUP35Q8NFH5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 REXO1L2P-201ENST00000425429 2069 ntBASIC11.81□□□□□ -0.52
NUP35Q8NFH5 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NUP35Q8NFH5 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms