Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 CDC14C-201ENST00000428251 1719 ntBASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 AC112492.5-201ENST00000421897 457 ntBASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 TMEM14DP-201ENST00000422205 345 ntBASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 ACA64.2-201ENST00000459014 129 ntBASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.29■□□□□ 0.2
PHTF2Q8N3S3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 TARDBPP1-201ENST00000442013 1203 ntBASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 RPSAP52-203ENST00000622976 1023 ntBASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 AL158212.4-201ENST00000624062 1286 ntBASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHTF2Q8N3S3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 TTTY23B-201ENST00000442790 549 ntBASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.27■□□□□ 0.2
PHTF2Q8N3S3 KRT17P8-201ENST00000540749 863 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms