Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
SIX5Q8N196 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX5Q8N196 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX5Q8N196 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.13■□□□□ 0.17
SIX5Q8N196 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SIX5Q8N196 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.13■□□□□ 0.17
SIX5Q8N196 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.13■□□□□ 0.17
SIX5Q8N196 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.13■□□□□ 0.17
SIX5Q8N196 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.13■□□□□ 0.17
SIX5Q8N196 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.13■□□□□ 0.17
SIX5Q8N196 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.13■□□□□ 0.17
SIX5Q8N196 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.13■□□□□ 0.17
SIX5Q8N196 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.13■□□□□ 0.17
SIX5Q8N196 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.13■□□□□ 0.17
SIX5Q8N196 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.13■□□□□ 0.17
SIX5Q8N196 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX5Q8N196 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.13■□□□□ 0.17
SIX5Q8N196 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX5Q8N196 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.13■□□□□ 0.17
SIX5Q8N196 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX5Q8N196 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.13■□□□□ 0.17
SIX5Q8N196 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX5Q8N196 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX5Q8N196 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX5Q8N196 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.13■□□□□ 0.17
SIX5Q8N196 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SIX5Q8N196 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.12■□□□□ 0.17
SIX5Q8N196 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SIX5Q8N196 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SIX5Q8N196 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.12■□□□□ 0.17
SIX5Q8N196 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
SIX5Q8N196 AC138028.6-201ENST00000616106 1482 ntBASIC16.12■□□□□ 0.17
SIX5Q8N196 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 AL603756.1-201ENST00000606511 2163 ntBASIC16.12■□□□□ 0.17
SIX5Q8N196 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SIX5Q8N196 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.12■□□□□ 0.17
SIX5Q8N196 FNTAP2-201ENST00000430308 634 ntBASIC16.12■□□□□ 0.17
SIX5Q8N196 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.12■□□□□ 0.17
SIX5Q8N196 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.12■□□□□ 0.17
SIX5Q8N196 AC005077.2-201ENST00000449786 690 ntBASIC16.12■□□□□ 0.17
SIX5Q8N196 AL591846.1-201ENST00000451736 433 ntBASIC16.12■□□□□ 0.17
SIX5Q8N196 AC022137.2-201ENST00000503482 481 ntBASIC16.12■□□□□ 0.17
SIX5Q8N196 SLED1-202ENST00000512051 380 ntBASIC16.12■□□□□ 0.17
SIX5Q8N196 SCARNA20.5-201ENST00000516991 142 ntBASIC16.12■□□□□ 0.17
SIX5Q8N196 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.12■□□□□ 0.17
SIX5Q8N196 AC005695.3-201ENST00000614522 232 ntBASIC16.12■□□□□ 0.17
SIX5Q8N196 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.12■□□□□ 0.17
SIX5Q8N196 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.12■□□□□ 0.17
SIX5Q8N196 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.12■□□□□ 0.17
SIX5Q8N196 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.12■□□□□ 0.17
SIX5Q8N196 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.12■□□□□ 0.17
SIX5Q8N196 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.12■□□□□ 0.17
SIX5Q8N196 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX5Q8N196 REXO1L8P-201ENST00000604378 1897 ntBASIC16.12■□□□□ 0.17
SIX5Q8N196 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.11■□□□□ 0.17
SIX5Q8N196 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SIX5Q8N196 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.11■□□□□ 0.17
SIX5Q8N196 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
SIX5Q8N196 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 C8orf49-201ENST00000525043 1968 ntBASIC16.11■□□□□ 0.17
SIX5Q8N196 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.11■□□□□ 0.17
SIX5Q8N196 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SIX5Q8N196 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.11■□□□□ 0.17
SIX5Q8N196 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.11■□□□□ 0.17
SIX5Q8N196 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SIX5Q8N196 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX5Q8N196 AL662890.1-201ENST00000396818 632 ntBASIC16.11■□□□□ 0.17
SIX5Q8N196 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SIX5Q8N196 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SIX5Q8N196 STK33P1-201ENST00000423835 1218 ntBASIC16.11■□□□□ 0.17
SIX5Q8N196 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.11■□□□□ 0.17
SIX5Q8N196 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms