Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 AC104306.2-201ENST00000451877 341 ntBASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 AP001258.2-201ENST00000529891 490 ntBASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 AC097359.3-201ENST00000603982 1210 ntBASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 AC093813.1-201ENST00000605066 256 ntBASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 AC107373.2-201ENST00000607735 490 ntBASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.57■□□□□ 0.08
TMEFF1Q8IYR6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 AC018892.3-201ENST00000623986 2499 ntBASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 FAM197Y7-201ENST00000432892 766 ntBASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 AC025279.2-201ENST00000569730 653 ntBASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TMEFF1Q8IYR6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 ME2P1-201ENST00000426028 1970 ntBASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 AC078819.1-201ENST00000547454 765 ntBASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 AC012085.1-201ENST00000548270 765 ntBASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 MIR4741-201ENST00000579822 90 ntBASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.55■□□□□ 0.08
TMEFF1Q8IYR6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms