Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 GGT3P-204ENST00000453783 1664 ntBASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 FTH1P14-201ENST00000482930 551 ntBASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 AP001063.1-201ENST00000568332 529 ntBASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RP1L1Q8IWN7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 AC134312.5-201ENST00000568031 1313 ntBASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 SOCS2P1-201ENST00000417727 557 ntBASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 AC104306.2-201ENST00000451877 341 ntBASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 AC079328.1-201ENST00000560358 952 ntBASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RP1L1Q8IWN7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 AC091804.1-201ENST00000486888 567 ntBASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 AC133539.2-201ENST00000604757 467 ntBASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 MIR6727-201ENST00000620702 65 ntBASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 AC008687.7-202ENST00000637404 953 ntBASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RP1L1Q8IWN7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms