Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
APLFQ8IW19 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.73■□□□□ 0.11
APLFQ8IW19 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.73■□□□□ 0.11
APLFQ8IW19 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
APLFQ8IW19 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APLFQ8IW19 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.73■□□□□ 0.11
APLFQ8IW19 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.73■□□□□ 0.11
APLFQ8IW19 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APLFQ8IW19 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APLFQ8IW19 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.72■□□□□ 0.11
APLFQ8IW19 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
APLFQ8IW19 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.72■□□□□ 0.11
APLFQ8IW19 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
APLFQ8IW19 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.72■□□□□ 0.11
APLFQ8IW19 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APLFQ8IW19 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
APLFQ8IW19 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
APLFQ8IW19 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.72■□□□□ 0.11
APLFQ8IW19 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APLFQ8IW19 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
APLFQ8IW19 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.72■□□□□ 0.11
APLFQ8IW19 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.72■□□□□ 0.11
APLFQ8IW19 FAM58DP-201ENST00000428076 619 ntBASIC15.72■□□□□ 0.11
APLFQ8IW19 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.72■□□□□ 0.11
APLFQ8IW19 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.72■□□□□ 0.11
APLFQ8IW19 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.72■□□□□ 0.11
APLFQ8IW19 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.72■□□□□ 0.11
APLFQ8IW19 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.72■□□□□ 0.11
APLFQ8IW19 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.72■□□□□ 0.11
APLFQ8IW19 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.72■□□□□ 0.11
APLFQ8IW19 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.72■□□□□ 0.11
APLFQ8IW19 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.72■□□□□ 0.11
APLFQ8IW19 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APLFQ8IW19 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
APLFQ8IW19 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
APLFQ8IW19 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
APLFQ8IW19 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APLFQ8IW19 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
APLFQ8IW19 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
APLFQ8IW19 FRMD8P1-201ENST00000440433 1524 ntBASIC15.72■□□□□ 0.11
APLFQ8IW19 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.72■□□□□ 0.11
APLFQ8IW19 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
APLFQ8IW19 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APLFQ8IW19 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.72■□□□□ 0.11
APLFQ8IW19 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
APLFQ8IW19 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.72■□□□□ 0.11
APLFQ8IW19 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
APLFQ8IW19 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
APLFQ8IW19 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.71■□□□□ 0.11
APLFQ8IW19 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
APLFQ8IW19 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 TUBB3P1-201ENST00000405796 1332 ntBASIC15.71■□□□□ 0.11
APLFQ8IW19 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
APLFQ8IW19 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
APLFQ8IW19 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.71■□□□□ 0.11
APLFQ8IW19 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
APLFQ8IW19 HMGA1P7-201ENST00000406908 502 ntBASIC15.71■□□□□ 0.11
APLFQ8IW19 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
APLFQ8IW19 GPS2P2-201ENST00000430745 888 ntBASIC15.71■□□□□ 0.11
APLFQ8IW19 KLF2P3-201ENST00000451977 1087 ntBASIC15.71■□□□□ 0.11
APLFQ8IW19 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.71■□□□□ 0.11
APLFQ8IW19 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
APLFQ8IW19 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
APLFQ8IW19 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.71■□□□□ 0.11
APLFQ8IW19 DUX4L17-201ENST00000557360 1267 ntBASIC15.71■□□□□ 0.11
APLFQ8IW19 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.71■□□□□ 0.11
APLFQ8IW19 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.71■□□□□ 0.11
APLFQ8IW19 AC084121.4-201ENST00000641598 221 ntBASIC15.71■□□□□ 0.11
APLFQ8IW19 AF228730.8-201ENST00000642140 221 ntBASIC15.71■□□□□ 0.11
APLFQ8IW19 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
APLFQ8IW19 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
APLFQ8IW19 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
APLFQ8IW19 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APLFQ8IW19 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.71■□□□□ 0.11
APLFQ8IW19 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.71■□□□□ 0.11
APLFQ8IW19 AC015656.1-201ENST00000624209 3578 ntBASIC15.71■□□□□ 0.1
APLFQ8IW19 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.71■□□□□ 0.1
APLFQ8IW19 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
APLFQ8IW19 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
APLFQ8IW19 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
APLFQ8IW19 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms