Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 AC007292.2-201ENST00000593524 1812 ntBASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 RN7SL589P-201ENST00000481268 310 ntBASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.71■□□□□ 0.26
CCDC50Q8IVM0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
CCDC50Q8IVM0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 BNIP3P1-202ENST00000550043 1585 ntBASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 FAM86C2P-203ENST00000528684 1004 ntBASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 AL359258.3-201ENST00000622910 2331 ntBASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 AL691432.1-201ENST00000596308 1422 ntBASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCDC50Q8IVM0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 AC090616.6-203ENST00000579186 1945 ntBASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 AC026396.1-201ENST00000419388 421 ntBASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 SPDYE11-202ENST00000450699 704 ntBASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 SPDYE9P-201ENST00000570642 692 ntBASIC16.69■□□□□ 0.26
CCDC50Q8IVM0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms