Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC71Q8IV32 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 AC069120.2-201ENST00000524091 540 ntBASIC14.82□□□□□ -0.04
CCDC71Q8IV32 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 AL138918.1-201ENST00000568306 659 ntBASIC14.82□□□□□ -0.04
CCDC71Q8IV32 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 AF228730.6-201ENST00000641497 218 ntBASIC14.82□□□□□ -0.04
CCDC71Q8IV32 AC084121.3-201ENST00000641716 218 ntBASIC14.82□□□□□ -0.04
CCDC71Q8IV32 AC105233.6-201ENST00000642093 218 ntBASIC14.82□□□□□ -0.04
CCDC71Q8IV32 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC71Q8IV32 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 MIR4453-201ENST00000584019 89 ntBASIC14.81□□□□□ -0.04
CCDC71Q8IV32 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC71Q8IV32 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms