Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CD81-202ENST00000381036 880 ntTSL 3 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 PPP6R2P1-201ENST00000450880 1275 ntBASIC10.53□□□□□ -0.72
SCXQ7RTU7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 KRT18P34-201ENST00000488218 1270 ntBASIC10.53□□□□□ -0.72
SCXQ7RTU7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 AC069120.2-201ENST00000524091 540 ntBASIC10.53□□□□□ -0.72
SCXQ7RTU7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 AC078925.2-201ENST00000624013 1973 ntBASIC10.53□□□□□ -0.72
SCXQ7RTU7 PPP1R26P4-201ENST00000619065 3527 ntBASIC10.53□□□□□ -0.72
SCXQ7RTU7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 ABR-205ENST00000544583 5595 ntTSL 2 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
SCXQ7RTU7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
SCXQ7RTU7 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
SCXQ7RTU7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SCXQ7RTU7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
SCXQ7RTU7 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.72
SCXQ7RTU7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
SCXQ7RTU7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.72
SCXQ7RTU7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SCXQ7RTU7 AL009178.2-201ENST00000597278 2719 ntBASIC10.52□□□□□ -0.72
SCXQ7RTU7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SCXQ7RTU7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC10.52□□□□□ -0.72
SCXQ7RTU7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 LINC00895-201ENST00000629028 1637 ntBASIC10.52□□□□□ -0.73
SCXQ7RTU7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 AC105233.2-201ENST00000523697 349 ntBASIC10.52□□□□□ -0.73
SCXQ7RTU7 AF228730.5-201ENST00000530288 346 ntBASIC10.52□□□□□ -0.73
SCXQ7RTU7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 AL138918.1-201ENST00000568306 659 ntBASIC10.52□□□□□ -0.73
SCXQ7RTU7 MIR4492-201ENST00000581627 80 ntBASIC10.52□□□□□ -0.73
SCXQ7RTU7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 AL158211.3-201ENST00000607385 239 ntBASIC10.52□□□□□ -0.73
SCXQ7RTU7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 LINC02012-201ENST00000608206 1725 ntBASIC10.52□□□□□ -0.73
SCXQ7RTU7 TUBB8P12-201ENST00000308911 1335 ntBASIC10.52□□□□□ -0.73
SCXQ7RTU7 TUBB7P-202ENST00000428444 1305 ntBASIC10.52□□□□□ -0.73
SCXQ7RTU7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 TUBB8P7-204ENST00000567960 1332 ntBASIC10.52□□□□□ -0.73
SCXQ7RTU7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms