Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 AC105250.1-201ENST00000509378 2057 ntBASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 AC051619.7-201ENST00000568314 623 ntBASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 MIR6080-201ENST00000617359 66 ntBASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.18□□□□□ -0.14
NHLRC1Q6VVB1 PRAL-201ENST00000624952 3286 ntBASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 RPL37AP1-201ENST00000412502 279 ntBASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 AL080243.2-201ENST00000418783 582 ntBASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.17□□□□□ -0.14
NHLRC1Q6VVB1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms