Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 RPS8P6-201ENST00000426177 609 ntBASIC16.13■□□□□ 0.17
CASC4Q6P4E1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 AL139010.1-201ENST00000454878 894 ntBASIC16.13■□□□□ 0.17
CASC4Q6P4E1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 AC006486.2-201ENST00000624246 2199 ntBASIC16.13■□□□□ 0.17
CASC4Q6P4E1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CASC4Q6P4E1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 AC009090.5-201ENST00000624886 2285 ntBASIC16.12■□□□□ 0.17
CASC4Q6P4E1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 MIR346-201ENST00000362234 95 ntBASIC16.12■□□□□ 0.17
CASC4Q6P4E1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 AL022342.1-201ENST00000400363 863 ntBASIC16.12■□□□□ 0.17
CASC4Q6P4E1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 AL592309.1-201ENST00000443127 649 ntBASIC16.12■□□□□ 0.17
CASC4Q6P4E1 ACTG1P14-201ENST00000446382 1122 ntBASIC16.12■□□□□ 0.17
CASC4Q6P4E1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 KRT8P23-201ENST00000560090 1207 ntBASIC16.12■□□□□ 0.17
CASC4Q6P4E1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CASC4Q6P4E1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 HTR5BP-201ENST00000430851 1154 ntBASIC16.11■□□□□ 0.17
CASC4Q6P4E1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.11■□□□□ 0.17
CASC4Q6P4E1 SLC25A39P2-201ENST00000537614 270 ntBASIC16.11■□□□□ 0.17
CASC4Q6P4E1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms