Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIF1Q5UIP0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIF1Q5UIP0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIF1Q5UIP0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.03■□□□□ -0
RIF1Q5UIP0 LYPLA2P1-203ENST00000447689 696 ntBASIC15.03■□□□□ -0
RIF1Q5UIP0 PHKG1P2-201ENST00000457537 863 ntBASIC15.03■□□□□ -0
RIF1Q5UIP0 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC15.03■□□□□ -0
RIF1Q5UIP0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.03■□□□□ -0
RIF1Q5UIP0 AC005618.3-201ENST00000624928 458 ntBASIC15.03■□□□□ -0
RIF1Q5UIP0 HYMAI-201ENST00000635591 3347 ntBASIC15.03■□□□□ -0
RIF1Q5UIP0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.03■□□□□ -0
RIF1Q5UIP0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.03■□□□□ -0
RIF1Q5UIP0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RIF1Q5UIP0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RIF1Q5UIP0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RIF1Q5UIP0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RIF1Q5UIP0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RIF1Q5UIP0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
RIF1Q5UIP0 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RIF1Q5UIP0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.02■□□□□ -0
RIF1Q5UIP0 GCSHP3-201ENST00000431120 391 ntBASIC15.02■□□□□ -0
RIF1Q5UIP0 FAM58BP-201ENST00000439056 645 ntBASIC15.02■□□□□ -0
RIF1Q5UIP0 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC15.02■□□□□ -0
RIF1Q5UIP0 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC15.02■□□□□ -0
RIF1Q5UIP0 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC15.02■□□□□ -0
RIF1Q5UIP0 ENPP7P14-201ENST00000621765 1040 ntBASIC15.02■□□□□ -0
RIF1Q5UIP0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RIF1Q5UIP0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.02■□□□□ -0
RIF1Q5UIP0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.02■□□□□ -0
RIF1Q5UIP0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RIF1Q5UIP0 AC018892.3-201ENST00000623986 2499 ntBASIC15.02■□□□□ -0
RIF1Q5UIP0 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 RN7SL163P-201ENST00000583100 276 ntBASIC15.02□□□□□ -0.01
RIF1Q5UIP0 MIR4522-201ENST00000584932 87 ntBASIC15.02□□□□□ -0.01
RIF1Q5UIP0 AC004686.1-201ENST00000605113 538 ntBASIC15.02□□□□□ -0.01
RIF1Q5UIP0 AC073911.3-201ENST00000624401 631 ntBASIC15.02□□□□□ -0.01
RIF1Q5UIP0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 AC148477.4-201ENST00000613430 1793 ntBASIC15.02□□□□□ -0.01
RIF1Q5UIP0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RIF1Q5UIP0 TNXA-203ENST00000507684 2038 ntBASIC15.01□□□□□ -0.01
RIF1Q5UIP0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 ACTBP8-201ENST00000403258 1108 ntBASIC15.01□□□□□ -0.01
RIF1Q5UIP0 AL357563.1-201ENST00000404728 395 ntBASIC15.01□□□□□ -0.01
RIF1Q5UIP0 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 MIR4683-201ENST00000579659 81 ntBASIC15.01□□□□□ -0.01
RIF1Q5UIP0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 AC026320.2-201ENST00000434379 478 ntBASIC15.01□□□□□ -0.01
RIF1Q5UIP0 AC018463.1-201ENST00000456674 917 ntBASIC15.01□□□□□ -0.01
RIF1Q5UIP0 AC024293.1-201ENST00000467930 498 ntBASIC15.01□□□□□ -0.01
RIF1Q5UIP0 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
RIF1Q5UIP0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms