Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 AC133552.6-201ENST00000613406 534 ntBASIC16.63■□□□□ 0.25
VARS2Q5ST30 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 REXO1L6P-201ENST00000603433 1515 ntBASIC16.63■□□□□ 0.25
VARS2Q5ST30 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
VARS2Q5ST30 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARS2Q5ST30 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARS2Q5ST30 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARS2Q5ST30 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 AC005229.1-201ENST00000392885 409 ntBASIC16.62■□□□□ 0.25
VARS2Q5ST30 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VARS2Q5ST30 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 AP001889.1-201ENST00000525414 633 ntBASIC16.62■□□□□ 0.25
VARS2Q5ST30 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 AC009486.1-201ENST00000569860 813 ntBASIC16.62■□□□□ 0.25
VARS2Q5ST30 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 AP001542.1-201ENST00000591314 200 ntBASIC16.62■□□□□ 0.25
VARS2Q5ST30 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 AC068587.10-201ENST00000641210 219 ntBASIC16.62■□□□□ 0.25
VARS2Q5ST30 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARS2Q5ST30 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARS2Q5ST30 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARS2Q5ST30 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARS2Q5ST30 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARS2Q5ST30 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
VARS2Q5ST30 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 PDIA3P1-201ENST00000471856 1510 ntBASIC16.61■□□□□ 0.25
VARS2Q5ST30 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 MTND2P25-201ENST00000449028 610 ntBASIC16.61■□□□□ 0.25
VARS2Q5ST30 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 AP001063.1-201ENST00000568332 529 ntBASIC16.61■□□□□ 0.25
VARS2Q5ST30 AC107373.2-201ENST00000607735 490 ntBASIC16.61■□□□□ 0.25
VARS2Q5ST30 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 AC112504.1-201ENST00000623415 1841 ntBASIC16.61■□□□□ 0.25
VARS2Q5ST30 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.61■□□□□ 0.25
VARS2Q5ST30 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VARS2Q5ST30 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms