Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CERKLQ49MI3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CERKLQ49MI3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CERKLQ49MI3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CERKLQ49MI3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CERKLQ49MI3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CERKLQ49MI3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CERKLQ49MI3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CERKLQ49MI3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.29■□□□□ 0.52
CERKLQ49MI3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CERKLQ49MI3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CERKLQ49MI3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CERKLQ49MI3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CERKLQ49MI3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CERKLQ49MI3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CERKLQ49MI3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CERKLQ49MI3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CERKLQ49MI3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CERKLQ49MI3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.29■□□□□ 0.52
CERKLQ49MI3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CERKLQ49MI3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CERKLQ49MI3 FO681548.1-201ENST00000455617 1132 ntBASIC18.29■□□□□ 0.52
CERKLQ49MI3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
CERKLQ49MI3 AC092658.1-201ENST00000505836 891 ntBASIC18.29■□□□□ 0.52
CERKLQ49MI3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.29■□□□□ 0.52
CERKLQ49MI3 AL583810.1-201ENST00000553344 1045 ntBASIC18.29■□□□□ 0.52
CERKLQ49MI3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.29■□□□□ 0.52
CERKLQ49MI3 AC244669.2-201ENST00000612320 853 ntBASIC18.29■□□□□ 0.52
CERKLQ49MI3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CERKLQ49MI3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.29■□□□□ 0.52
CERKLQ49MI3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CERKLQ49MI3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.29■□□□□ 0.52
CERKLQ49MI3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CERKLQ49MI3 AC024909.3-201ENST00000611513 2257 ntBASIC18.29■□□□□ 0.52
CERKLQ49MI3 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.29■□□□□ 0.52
CERKLQ49MI3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CERKLQ49MI3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CERKLQ49MI3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CERKLQ49MI3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 AP005019.2-201ENST00000615104 511 ntBASIC18.28■□□□□ 0.52
CERKLQ49MI3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.28■□□□□ 0.52
CERKLQ49MI3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CERKLQ49MI3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
CERKLQ49MI3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CERKLQ49MI3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CERKLQ49MI3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CERKLQ49MI3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.27■□□□□ 0.52
CERKLQ49MI3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CERKLQ49MI3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CERKLQ49MI3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CERKLQ49MI3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CERKLQ49MI3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
CERKLQ49MI3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CERKLQ49MI3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CERKLQ49MI3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CERKLQ49MI3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CERKLQ49MI3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CERKLQ49MI3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CERKLQ49MI3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.27■□□□□ 0.52
CERKLQ49MI3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CERKLQ49MI3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CERKLQ49MI3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.27■□□□□ 0.52
CERKLQ49MI3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms