Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COL16A1Q07092 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC20.54■□□□□ 0.88
COL16A1Q07092 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC20.54■□□□□ 0.88
COL16A1Q07092 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC20.54■□□□□ 0.88
COL16A1Q07092 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL16A1Q07092 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
COL16A1Q07092 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
COL16A1Q07092 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC20.54■□□□□ 0.88
COL16A1Q07092 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COL16A1Q07092 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL16A1Q07092 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC20.54■□□□□ 0.88
COL16A1Q07092 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL16A1Q07092 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL16A1Q07092 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COL16A1Q07092 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC20.53■□□□□ 0.88
COL16A1Q07092 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL16A1Q07092 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC20.53■□□□□ 0.88
COL16A1Q07092 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 AC138696.2-201ENST00000607376 223 ntBASIC20.53■□□□□ 0.88
COL16A1Q07092 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC20.53■□□□□ 0.88
COL16A1Q07092 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
COL16A1Q07092 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
COL16A1Q07092 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC20.53■□□□□ 0.88
COL16A1Q07092 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 KRT8P31-201ENST00000504812 1408 ntBASIC20.53■□□□□ 0.88
COL16A1Q07092 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
COL16A1Q07092 STK16-203ENST00000409516 895 ntTSL 2 BASIC20.53■□□□□ 0.88
COL16A1Q07092 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC20.53■□□□□ 0.88
COL16A1Q07092 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC20.53■□□□□ 0.88
COL16A1Q07092 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC20.53■□□□□ 0.88
COL16A1Q07092 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 FTLP5-201ENST00000586853 534 ntBASIC20.53■□□□□ 0.88
COL16A1Q07092 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL16A1Q07092 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.52■□□□□ 0.88
COL16A1Q07092 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL16A1Q07092 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL16A1Q07092 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC20.52■□□□□ 0.88
COL16A1Q07092 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL16A1Q07092 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
COL16A1Q07092 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL16A1Q07092 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL16A1Q07092 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL16A1Q07092 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL16A1Q07092 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL16A1Q07092 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
COL16A1Q07092 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC20.52■□□□□ 0.88
COL16A1Q07092 FTH1P22-201ENST00000456305 520 ntBASIC20.52■□□□□ 0.88
COL16A1Q07092 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC20.52■□□□□ 0.88
COL16A1Q07092 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC20.52■□□□□ 0.88
COL16A1Q07092 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC20.52■□□□□ 0.88
COL16A1Q07092 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.52■□□□□ 0.87
COL16A1Q07092 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
COL16A1Q07092 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
COL16A1Q07092 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL16A1Q07092 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL16A1Q07092 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.51■□□□□ 0.87
COL16A1Q07092 LINC01165-201ENST00000445190 1623 ntBASIC20.51■□□□□ 0.87
COL16A1Q07092 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.51■□□□□ 0.87
COL16A1Q07092 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.51■□□□□ 0.87
COL16A1Q07092 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL16A1Q07092 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.51■□□□□ 0.87
COL16A1Q07092 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL16A1Q07092 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL16A1Q07092 DUTP3-201ENST00000450025 415 ntBASIC20.51■□□□□ 0.87
COL16A1Q07092 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC20.51■□□□□ 0.87
COL16A1Q07092 CCNC-217ENST00000523985 958 ntTSL 2 BASIC20.51■□□□□ 0.87
COL16A1Q07092 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
COL16A1Q07092 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC20.51■□□□□ 0.87
COL16A1Q07092 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
COL16A1Q07092 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC20.51■□□□□ 0.87
COL16A1Q07092 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL16A1Q07092 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC20.51■□□□□ 0.87
COL16A1Q07092 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL16A1Q07092 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.51■□□□□ 0.87
COL16A1Q07092 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
COL16A1Q07092 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.51■□□□□ 0.87
COL16A1Q07092 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.51■□□□□ 0.87
COL16A1Q07092 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL16A1Q07092 NEFHP1-201ENST00000412845 2629 ntBASIC20.51■□□□□ 0.87
COL16A1Q07092 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL16A1Q07092 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COL16A1Q07092 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
COL16A1Q07092 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL16A1Q07092 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL16A1Q07092 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
COL16A1Q07092 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL16A1Q07092 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL16A1Q07092 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms