Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SSR4P1-203ENST00000599569 2260 ntBASIC14.42□□□□□ -0.1
LTBQ06643 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 KRT18P32-201ENST00000424695 1287 ntBASIC14.42□□□□□ -0.1
LTBQ06643 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.42□□□□□ -0.1
LTBQ06643 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.42□□□□□ -0.1
LTBQ06643 CNN2P2-201ENST00000443536 909 ntBASIC14.42□□□□□ -0.1
LTBQ06643 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.42□□□□□ -0.1
LTBQ06643 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.42□□□□□ -0.1
LTBQ06643 CNN2P3-201ENST00000450201 906 ntBASIC14.42□□□□□ -0.1
LTBQ06643 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.42□□□□□ -0.1
LTBQ06643 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.42□□□□□ -0.1
LTBQ06643 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.42□□□□□ -0.1
LTBQ06643 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.42□□□□□ -0.1
LTBQ06643 BANF1P1-201ENST00000553684 263 ntBASIC14.42□□□□□ -0.1
LTBQ06643 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.42□□□□□ -0.1
LTBQ06643 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.42□□□□□ -0.1
LTBQ06643 AL136317.3-201ENST00000618497 906 ntBASIC14.42□□□□□ -0.1
LTBQ06643 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.42□□□□□ -0.1
LTBQ06643 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.42□□□□□ -0.1
LTBQ06643 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LTBQ06643 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.42□□□□□ -0.1
LTBQ06643 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.42□□□□□ -0.1
LTBQ06643 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LTBQ06643 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.42□□□□□ -0.1
LTBQ06643 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.41□□□□□ -0.1
LTBQ06643 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.41□□□□□ -0.1
LTBQ06643 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.41□□□□□ -0.1
LTBQ06643 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.41□□□□□ -0.1
LTBQ06643 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.41□□□□□ -0.1
LTBQ06643 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 AC022532.1-201ENST00000624563 1728 ntBASIC14.41□□□□□ -0.1
LTBQ06643 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
LTBQ06643 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LTBQ06643 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LTBQ06643 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.41□□□□□ -0.1
LTBQ06643 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.41□□□□□ -0.1
LTBQ06643 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LTBQ06643 MIR943-201ENST00000401286 94 ntBASIC14.41□□□□□ -0.1
LTBQ06643 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.41□□□□□ -0.1
LTBQ06643 RBPMS2P1-201ENST00000437762 623 ntBASIC14.41□□□□□ -0.1
LTBQ06643 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.41□□□□□ -0.1
LTBQ06643 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.41□□□□□ -0.1
LTBQ06643 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.41□□□□□ -0.1
LTBQ06643 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.41□□□□□ -0.1
LTBQ06643 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.41□□□□□ -0.1
LTBQ06643 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.41□□□□□ -0.1
LTBQ06643 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LTBQ06643 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.41□□□□□ -0.1
LTBQ06643 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.41□□□□□ -0.1
LTBQ06643 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.41□□□□□ -0.1
LTBQ06643 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
LTBQ06643 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LTBQ06643 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.41□□□□□ -0.1
LTBQ06643 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.41□□□□□ -0.1
LTBQ06643 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
LTBQ06643 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
LTBQ06643 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LTBQ06643 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LTBQ06643 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LTBQ06643 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.41□□□□□ -0.1
LTBQ06643 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms