Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.76■□□□□ 0.43
CCNA1P78396 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CCNA1P78396 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.76■□□□□ 0.43
CCNA1P78396 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCNA1P78396 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.76■□□□□ 0.43
CCNA1P78396 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCNA1P78396 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCNA1P78396 TPM3P8-201ENST00000330554 643 ntBASIC17.76■□□□□ 0.43
CCNA1P78396 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCNA1P78396 KLF2P2-201ENST00000416807 1039 ntBASIC17.76■□□□□ 0.43
CCNA1P78396 AC004898.1-201ENST00000451057 766 ntBASIC17.76■□□□□ 0.43
CCNA1P78396 AL590640.2-201ENST00000457038 527 ntBASIC17.76■□□□□ 0.43
CCNA1P78396 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.76■□□□□ 0.43
CCNA1P78396 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.76■□□□□ 0.43
CCNA1P78396 MIR4313-201ENST00000580760 101 ntBASIC17.76■□□□□ 0.43
CCNA1P78396 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.76■□□□□ 0.43
CCNA1P78396 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCNA1P78396 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CCNA1P78396 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CCNA1P78396 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCNA1P78396 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCNA1P78396 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCNA1P78396 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCNA1P78396 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCNA1P78396 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.76■□□□□ 0.43
CCNA1P78396 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCNA1P78396 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCNA1P78396 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.75■□□□□ 0.43
CCNA1P78396 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CCNA1P78396 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNA1P78396 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCNA1P78396 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.75■□□□□ 0.43
CCNA1P78396 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCNA1P78396 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.75■□□□□ 0.43
CCNA1P78396 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CCNA1P78396 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCNA1P78396 SLC25A24P2-201ENST00000415059 510 ntBASIC17.75■□□□□ 0.43
CCNA1P78396 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.75■□□□□ 0.43
CCNA1P78396 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.75■□□□□ 0.43
CCNA1P78396 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
CCNA1P78396 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.75■□□□□ 0.43
CCNA1P78396 AC104982.3-201ENST00000581995 514 ntBASIC17.75■□□□□ 0.43
CCNA1P78396 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCNA1P78396 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.75■□□□□ 0.43
CCNA1P78396 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 AC005695.3-201ENST00000614522 232 ntBASIC17.75■□□□□ 0.43
CCNA1P78396 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.75■□□□□ 0.43
CCNA1P78396 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNA1P78396 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNA1P78396 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNA1P78396 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CCNA1P78396 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCNA1P78396 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNA1P78396 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCNA1P78396 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCNA1P78396 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.74■□□□□ 0.43
CCNA1P78396 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.74■□□□□ 0.43
CCNA1P78396 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCNA1P78396 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNA1P78396 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNA1P78396 AL354989.2-201ENST00000435838 1540 ntBASIC17.74■□□□□ 0.43
CCNA1P78396 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCNA1P78396 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNA1P78396 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNA1P78396 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CCNA1P78396 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.74■□□□□ 0.43
CCNA1P78396 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CCNA1P78396 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.74■□□□□ 0.43
CCNA1P78396 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNA1P78396 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNA1P78396 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.74■□□□□ 0.43
CCNA1P78396 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.74■□□□□ 0.43
CCNA1P78396 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCNA1P78396 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.74■□□□□ 0.43
CCNA1P78396 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.74■□□□□ 0.43
CCNA1P78396 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.74■□□□□ 0.43
CCNA1P78396 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCNA1P78396 AP006547.1-201ENST00000563435 692 ntBASIC17.74■□□□□ 0.43
CCNA1P78396 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.74■□□□□ 0.43
CCNA1P78396 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.74■□□□□ 0.43
CCNA1P78396 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.74■□□□□ 0.43
CCNA1P78396 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.74■□□□□ 0.43
CCNA1P78396 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNA1P78396 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNA1P78396 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNA1P78396 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms