Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM11AP58511 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SMIM11AP58511 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SMIM11AP58511 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM11AP58511 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 FAM220BP-201ENST00000377689 816 ntBASIC14.56□□□□□ -0.08
SMIM11AP58511 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.56□□□□□ -0.08
SMIM11AP58511 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.56□□□□□ -0.08
SMIM11AP58511 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SMIM11AP58511 PDPK2P-202ENST00000562415 1191 ntBASIC14.56□□□□□ -0.08
SMIM11AP58511 AC018845.2-201ENST00000568326 409 ntBASIC14.56□□□□□ -0.08
SMIM11AP58511 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM11AP58511 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SMIM11AP58511 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM11AP58511 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SMIM11AP58511 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SMIM11AP58511 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SMIM11AP58511 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SMIM11AP58511 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM11AP58511 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM11AP58511 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
SMIM11AP58511 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.55□□□□□ -0.08
SMIM11AP58511 AC009090.5-201ENST00000624886 2285 ntBASIC14.55□□□□□ -0.08
SMIM11AP58511 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.55□□□□□ -0.08
SMIM11AP58511 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SMIM11AP58511 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 CICP24-201ENST00000605464 2705 ntBASIC14.55□□□□□ -0.08
SMIM11AP58511 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SMIM11AP58511 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.55□□□□□ -0.08
SMIM11AP58511 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.55□□□□□ -0.08
SMIM11AP58511 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.55□□□□□ -0.08
SMIM11AP58511 RPL5P21-201ENST00000404620 815 ntBASIC14.55□□□□□ -0.08
SMIM11AP58511 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SMIM11AP58511 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.55□□□□□ -0.08
SMIM11AP58511 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.55□□□□□ -0.08
SMIM11AP58511 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.55□□□□□ -0.08
SMIM11AP58511 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.55□□□□□ -0.08
SMIM11AP58511 FAM86C2P-203ENST00000528684 1004 ntBASIC14.55□□□□□ -0.08
SMIM11AP58511 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.55□□□□□ -0.08
SMIM11AP58511 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.55□□□□□ -0.08
SMIM11AP58511 AC027307.2-201ENST00000591252 911 ntBASIC14.55□□□□□ -0.08
SMIM11AP58511 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.55□□□□□ -0.08
SMIM11AP58511 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.55□□□□□ -0.08
SMIM11AP58511 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 AC104692.2-201ENST00000603054 253 ntBASIC14.55□□□□□ -0.08
SMIM11AP58511 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SMIM11AP58511 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.55□□□□□ -0.08
SMIM11AP58511 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
SMIM11AP58511 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
SMIM11AP58511 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.55□□□□□ -0.08
SMIM11AP58511 AL136379.1-201ENST00000623471 2642 ntBASIC14.55□□□□□ -0.08
SMIM11AP58511 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.55□□□□□ -0.08
SMIM11AP58511 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMIM11AP58511 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms