Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUBP1P53384 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUBP1P53384 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
NUBP1P53384 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUBP1P53384 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUBP1P53384 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUBP1P53384 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUBP1P53384 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUBP1P53384 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.77■□□□□ 0.12
NUBP1P53384 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUBP1P53384 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUBP1P53384 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.77■□□□□ 0.12
NUBP1P53384 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.77■□□□□ 0.12
NUBP1P53384 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUBP1P53384 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUBP1P53384 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NUBP1P53384 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.77■□□□□ 0.12
NUBP1P53384 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.77■□□□□ 0.12
NUBP1P53384 GTF3AP1-201ENST00000416942 1004 ntBASIC15.77■□□□□ 0.12
NUBP1P53384 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.77■□□□□ 0.12
NUBP1P53384 SLC8A1-AS1-204ENST00000427354 790 ntTSL 3 BASIC15.77■□□□□ 0.12
NUBP1P53384 AC069218.1-201ENST00000435269 762 ntBASIC15.77■□□□□ 0.12
NUBP1P53384 Z80107.1-201ENST00000436830 412 ntBASIC15.77■□□□□ 0.12
NUBP1P53384 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NUBP1P53384 AC005351.1-201ENST00000511152 786 ntBASIC15.77■□□□□ 0.12
NUBP1P53384 AC024681.1-201ENST00000521917 487 ntBASIC15.77■□□□□ 0.12
NUBP1P53384 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.77■□□□□ 0.12
NUBP1P53384 CCDC58P5-201ENST00000536923 432 ntBASIC15.77■□□□□ 0.12
NUBP1P53384 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.77■□□□□ 0.12
NUBP1P53384 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.77■□□□□ 0.12
NUBP1P53384 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.77■□□□□ 0.12
NUBP1P53384 LINC02251-201ENST00000554798 1224 ntTSL 5 BASIC15.77■□□□□ 0.12
NUBP1P53384 AC004232.2-201ENST00000574245 821 ntBASIC15.77■□□□□ 0.12
NUBP1P53384 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
NUBP1P53384 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.77■□□□□ 0.11
NUBP1P53384 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
NUBP1P53384 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.77■□□□□ 0.11
NUBP1P53384 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.77■□□□□ 0.11
NUBP1P53384 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
NUBP1P53384 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NUBP1P53384 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NUBP1P53384 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NUBP1P53384 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.77■□□□□ 0.11
NUBP1P53384 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NUBP1P53384 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NUBP1P53384 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
NUBP1P53384 GEMIN2-202ENST00000308317 1420 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
NUBP1P53384 DRD5P1-201ENST00000456605 1438 ntBASIC15.77■□□□□ 0.11
NUBP1P53384 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
NUBP1P53384 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NUBP1P53384 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NUBP1P53384 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NUBP1P53384 AC114876.1-201ENST00000490962 1366 ntBASIC15.76■□□□□ 0.11
NUBP1P53384 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NUBP1P53384 KRT8P35-201ENST00000483942 1338 ntBASIC15.76■□□□□ 0.11
NUBP1P53384 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NUBP1P53384 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC15.76■□□□□ 0.11
NUBP1P53384 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.76■□□□□ 0.11
NUBP1P53384 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NUBP1P53384 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.76■□□□□ 0.11
NUBP1P53384 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NUBP1P53384 ING3-202ENST00000339121 1222 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NUBP1P53384 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
NUBP1P53384 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC15.76■□□□□ 0.11
NUBP1P53384 AL355802.1-201ENST00000417591 990 ntTSL 3 BASIC15.76■□□□□ 0.11
NUBP1P53384 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC15.76■□□□□ 0.11
NUBP1P53384 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.76■□□□□ 0.11
NUBP1P53384 AK3P5-201ENST00000432033 519 ntBASIC15.76■□□□□ 0.11
NUBP1P53384 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC15.76■□□□□ 0.11
NUBP1P53384 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.76■□□□□ 0.11
NUBP1P53384 NKAIN1P1-201ENST00000435754 582 ntBASIC15.76■□□□□ 0.11
NUBP1P53384 AC011742.3-201ENST00000439053 820 ntBASIC15.76■□□□□ 0.11
NUBP1P53384 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NUBP1P53384 AC098935.1-201ENST00000446057 611 ntBASIC15.76■□□□□ 0.11
NUBP1P53384 AC006042.1-201ENST00000449931 524 ntTSL 4 BASIC15.76■□□□□ 0.11
NUBP1P53384 KRT18P43-201ENST00000469825 1281 ntBASIC15.76■□□□□ 0.11
NUBP1P53384 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC15.76■□□□□ 0.11
NUBP1P53384 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC15.76■□□□□ 0.11
NUBP1P53384 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC15.76■□□□□ 0.11
NUBP1P53384 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.76■□□□□ 0.11
NUBP1P53384 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.76■□□□□ 0.11
NUBP1P53384 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.76■□□□□ 0.11
NUBP1P53384 AC008676.3-201ENST00000521237 435 ntBASIC15.76■□□□□ 0.11
NUBP1P53384 MTCO1P47-201ENST00000523889 1271 ntBASIC15.76■□□□□ 0.11
NUBP1P53384 PTS-202ENST00000524931 696 ntTSL 3 BASIC15.76■□□□□ 0.11
NUBP1P53384 PTS-204ENST00000525803 625 ntTSL 3 BASIC15.76■□□□□ 0.11
NUBP1P53384 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.76■□□□□ 0.11
NUBP1P53384 ARL1-203ENST00000539055 1231 ntTSL 2 BASIC15.76■□□□□ 0.11
NUBP1P53384 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.76■□□□□ 0.11
NUBP1P53384 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC15.76■□□□□ 0.11
NUBP1P53384 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.76■□□□□ 0.11
NUBP1P53384 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.76■□□□□ 0.11
NUBP1P53384 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NUBP1P53384 BNIP3P38-201ENST00000601117 544 ntBASIC15.76■□□□□ 0.11
NUBP1P53384 AC040174.2-201ENST00000602701 465 ntBASIC15.76■□□□□ 0.11
NUBP1P53384 AC022306.2-201ENST00000617563 647 ntBASIC15.76■□□□□ 0.11
NUBP1P53384 HPVC1-201ENST00000629899 1198 ntBASIC15.76■□□□□ 0.11
NUBP1P53384 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.76■□□□□ 0.11
NUBP1P53384 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NUBP1P53384 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms