Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HCFC1P51610 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HCFC1P51610 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.62□□□□□ -0.23
HCFC1P51610 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCFC1P51610 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCFC1P51610 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HCFC1P51610 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.62□□□□□ -0.23
HCFC1P51610 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.62□□□□□ -0.23
HCFC1P51610 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCFC1P51610 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCFC1P51610 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.62□□□□□ -0.23
HCFC1P51610 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCFC1P51610 MIR663B-201ENST00000408361 115 ntBASIC13.62□□□□□ -0.23
HCFC1P51610 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
HCFC1P51610 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.62□□□□□ -0.23
HCFC1P51610 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.62□□□□□ -0.23
HCFC1P51610 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCFC1P51610 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.62□□□□□ -0.23
HCFC1P51610 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.62□□□□□ -0.23
HCFC1P51610 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HCFC1P51610 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.62□□□□□ -0.23
HCFC1P51610 AC138951.2-201ENST00000623455 1161 ntBASIC13.62□□□□□ -0.23
HCFC1P51610 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCFC1P51610 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCFC1P51610 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCFC1P51610 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.62□□□□□ -0.23
HCFC1P51610 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HCFC1P51610 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
HCFC1P51610 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HCFC1P51610 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.62□□□□□ -0.23
HCFC1P51610 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.62□□□□□ -0.23
HCFC1P51610 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.61□□□□□ -0.23
HCFC1P51610 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HCFC1P51610 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
HCFC1P51610 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HCFC1P51610 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.61□□□□□ -0.23
HCFC1P51610 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.61□□□□□ -0.23
HCFC1P51610 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.61□□□□□ -0.23
HCFC1P51610 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.61□□□□□ -0.23
HCFC1P51610 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.61□□□□□ -0.23
HCFC1P51610 AC145423.3-201ENST00000615987 467 ntBASIC13.61□□□□□ -0.23
HCFC1P51610 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.61□□□□□ -0.23
HCFC1P51610 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
HCFC1P51610 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.61□□□□□ -0.23
HCFC1P51610 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HCFC1P51610 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HCFC1P51610 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.61□□□□□ -0.23
HCFC1P51610 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.61□□□□□ -0.23
HCFC1P51610 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.61□□□□□ -0.23
HCFC1P51610 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.61□□□□□ -0.23
HCFC1P51610 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.61□□□□□ -0.23
HCFC1P51610 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.61□□□□□ -0.23
HCFC1P51610 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.61□□□□□ -0.23
HCFC1P51610 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HCFC1P51610 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.61□□□□□ -0.23
HCFC1P51610 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.61□□□□□ -0.23
HCFC1P51610 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HCFC1P51610 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HCFC1P51610 ACTBP8-201ENST00000403258 1108 ntBASIC13.61□□□□□ -0.23
HCFC1P51610 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.61□□□□□ -0.23
HCFC1P51610 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.61□□□□□ -0.23
HCFC1P51610 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.61□□□□□ -0.23
HCFC1P51610 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.61□□□□□ -0.23
HCFC1P51610 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HCFC1P51610 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.61□□□□□ -0.23
HCFC1P51610 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.61□□□□□ -0.23
HCFC1P51610 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HCFC1P51610 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HCFC1P51610 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HCFC1P51610 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.6□□□□□ -0.23
HCFC1P51610 AL162727.3-201ENST00000635661 2787 ntBASIC13.6□□□□□ -0.23
HCFC1P51610 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
HCFC1P51610 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HCFC1P51610 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HCFC1P51610 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HCFC1P51610 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms